RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 HMGB1P1B2RPK0 211 aaPredicted RBP9.32□□□□□ -0.92
PBRM1-209ENST00000412587 SUN1O94901 812 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 MYBL2P10244 700 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 CYB5D1Q6P9G0 228 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 NLRP14Q86W24 1093 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 MAP7D3Q8IWC1 876 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 ZKSCAN4Q969J2 545 aaPredicted RBP9.32□□□□□ -0.92
PBRM1-209ENST00000412587 JAKMIP2Q96AA8 810 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF653Q96CK0 615 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.32□□□□□ -0.92
PBRM1-209ENST00000412587 UTP6Q9NYH9 597 aaKnown RBP9.32□□□□□ -0.92
PBRM1-209ENST00000412587 NKIRAS1Q9NYS0 192 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 KCNJ14Q9UNX9 436 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF711Q9Y462 761 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 TNS3Q68CZ2 1445 aa9.32□□□□□ -0.92
PBRM1-209ENST00000412587 SPECC1L-ADORA2AF8WAN1 911 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CHMP2AO43633 222 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF189O75820 626 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ARHGAP27Q6ZUM4 889 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 SLC35F6Q8N357 371 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF274Q96GC6 653 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ZDHHC9Q9Y397 364 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 DIAPH2O60879 1101 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CFBP00751 764 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 PDHA1P08559 390 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 USH1GQ495M9 461 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 DPY19L2Q6NUT2 758 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 IL17RAQ96F46 866 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 A1CFQ9NQ94 594 aaKnown RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 TNKSO95271 1327 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 AFF2P51816 1311 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 TMCC1O94876 653 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CHGBP05060 677 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 MYCLP12524 364 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 RPL13P26373 211 aaKnown RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 RPS6KA3P51812 740 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ME3Q16798 604 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CDC37L1Q7L3B6 337 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ST13P4Q8IZP2 240 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 REXO1Q8N1G1 1221 aaKnown RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF483Q8TF39 744 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CCDC77Q9BR77 488 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 OSBPL3Q9H4L5 887 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 KCNK9Q9NPC2 374 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 EVI5O60447 810 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 PTPN12Q05209 780 aaKnown RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 KCNB1Q14721 858 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 CLEC4GQ6UXB4 293 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 C11orf57Q6ZUT1 292 aaPredicted RBP9.31□□□□□ -0.92
PBRM1-209ENST00000412587 HAUS4Q9H6D7 363 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 ATP8A2Q9NTI2 1148 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 PALD1Q9ULE6 856 aa9.31□□□□□ -0.92
PBRM1-209ENST00000412587 hCG_2014768A0A024R1R8 64 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 PPP1R2P41236 205 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 KLC1Q07866 573 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 COG1Q8WTW3 980 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 C17orf50Q8WW18 174 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 OLFM3Q96PB7 478 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 SYNCQ9H7C4 482 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 LRWD1Q9UFC0 647 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 CSADQ9Y600 493 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 TCP10L2B9ZVM9 353 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 ATP2A2P16615 1042 aaKnown RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 CFAP221Q4G0U5 840 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 EAPPQ56P03 285 aaPredicted RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 SUSD4Q5VX71 490 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 EMBQ6PCB8 327 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 FANCBQ8NB91 859 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 HOMER2Q9NSB8 354 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 ZFATQ9P243 1243 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 TULP4Q9NRJ4 1543 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 TRPM1Q7Z4N2 1603 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 POLR2DO15514 142 aaKnown RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 LCA5Q86VQ0 697 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 VPS52Q8N1B4 723 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 EPN3Q9H201 632 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 CNOT10Q9H9A5 744 aaKnown RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 ZSWIM6Q9HCJ5 1215 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 MTRF1LQ9UGC7 380 aaKnown RBP9.3□□□□□ -0.92
PBRM1-209ENST00000412587 MCM8Q9UJA3 840 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
PBRM1-209ENST00000412587 TRAF5O00463 557 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms