RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KCTD2Q14681 263 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SEPT2Q15019 361 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 STX1AQ16623 288 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 MCM10Q7L590 875 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 MRPL50Q8N5N7 158 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD44Q8N8A2 993 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SPERTQ8NA61 448 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 KIFAP3Q92845 792 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 HNRNPABQ99729 332 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 SYT15Q9BQS2 421 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 BCL2L13Q9BXK5 485 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ACTR5Q9H9F9 607 aaPredicted RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 AMOTL2Q9Y2J4 779 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 COL6A1P12109 1028 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 CES1P23141 567 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 TSPAN7P41732 249 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 POLE2P56282 527 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SPRED3Q2MJR0 410 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 C10orf62Q5T681 223 aaPredicted RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 EFCAB2Q5VUJ9 269 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 PCNX4Q63HM2 1172 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ARMCX5Q6P1M9 558 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 BARGINQ6ZT62 677 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 C3orf62Q6ZUJ4 267 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 LSMEM2Q8N112 164 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 C7orf57Q8NEG2 295 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 APPL2Q8NEU8 664 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.76□□□□□ -1.49
HERC4-205ENST00000412272 NCSTNQ92542 709 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 NAF1Q96HR8 494 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 PNKPQ96T60 521 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SCAND2PQ9GZW5 306 aaPredicted RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 PARVGQ9HBI0 331 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 TDRD9Q8NDG6 1382 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 TET3O43151 1660 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ITIH6Q6UXX5 1313 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 GOLGA6L10A0A0M3HER8 536 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 H0Y3Z8 333 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 VAMP4O75379 141 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SARSP49591 514 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 GBE1Q04446 702 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 PPP2R3AQ06190 1150 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 KIF5AQ12840 1032 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 PPFIA1Q13136 1202 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ME3Q16798 604 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SLC44A4Q53GD3 710 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 TCERG1LQ5VWI1 586 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ZNF746Q6NUN9 644 aaPredicted RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 RNF10Q8N5U6 811 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 SH3GL2Q99962 352 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 RABEP2Q9H5N1 569 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 POLMQ9NP87 494 aaPredicted RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 RIMKLBQ9ULI2 386 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 ZNF148Q9UQR1 794 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 PCDHGB3Q9Y5G1 929 aa5.76□□□□□ -1.49
HERC4-205ENST00000412272 CLTCQ00610 1675 aaKnown RBP5.76□□□□□ -1.49
HERC4-205ENST00000412272 SPTLC1O15269 473 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ASAP2O43150 1006 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 TSPAN1O60635 241 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 DGKIO75912 1065 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 HNRNPCP07910 306 aaKnown RBP eCLIP5.75□□□□□ -1.492e-7■■■■□ 24.4
HERC4-205ENST00000412272 GLI1P08151 1106 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ETFBP38117 255 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ETV3P41162 512 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ACADSBP45954 432 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 CCNG1P51959 295 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ELF3P78545 371 aaPredicted RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 SKOR1P84550 965 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 LMNB2Q03252 620 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 BNIP1Q12981 228 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 E2F2Q14209 437 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 PCSK7Q16549 785 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 TRIM71Q2Q1W2 868 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 CCDC153Q494R4 210 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ANO7Q6IWH7 933 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 SESTD1Q86VW0 696 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 TNIP2Q8NFZ5 429 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 RUBCNQ92622 972 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 DDX27Q96GQ7 796 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 TRAPPC9Q96Q05 1148 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 SETDB2Q96T68 719 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 FAM167BQ9BTA0 163 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 GBA3Q9H227 469 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 TCF7L2Q9NQB0 619 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 PFDN4Q9NQP4 134 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 FKBP14Q9NWM8 211 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 LUC7L2Q9Y383 392 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 UGGT1Q9NYU2 1555 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ATP7AQ04656 1500 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 GOLGA6L7A0A1B0GV03 622 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 C19orf81C9J6K1 198 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 DNM1LO00429 736 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 BIRC5O15392 142 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 HNRNPRO43390 633 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 HOXC13P31276 330 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 CCT6AP40227 531 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 MKRN3Q13064 507 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 RIPK1Q13546 671 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 GKAP1Q5VSY0 366 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms