RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 CPLX2Q6PUV4 134 aaKnown RBP9.5□□□□□ -0.89
RPE-204ENST00000411934 NSMFQ6X4W1 530 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 RNF207Q6ZRF8 634 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 SRBD1Q8N5C6 995 aaKnown RBP9.5□□□□□ -0.89
RPE-204ENST00000411934 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 PIGSQ96S52 555 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 RNF26Q9BY78 433 aaPredicted RBP9.5□□□□□ -0.89
RPE-204ENST00000411934 UPF3BQ9BZI7 483 aaKnown RBP9.5□□□□□ -0.89
RPE-204ENST00000411934 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 BIN2Q9UBW5 565 aaPredicted RBP9.5□□□□□ -0.89
RPE-204ENST00000411934 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 PTPDC1A2A3K4 754 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 PPP1R11O60927 126 aaPredicted RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 CDKL5O76039 1030 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 CCL5P13501 91 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 CPA1P15085 419 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 RXRAP19793 462 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 EDNRBP24530 442 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 PDIA3P30101 505 aaKnown RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 GJA8P48165 433 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 RPS6P62753 249 aaKnown RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 CACNB2Q08289 660 aaPredicted RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 RABEP1Q15276 862 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 CCL14Q16627 93 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 MCTP2Q6DN12 878 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 HOMER1Q86YM7 354 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 CCDC12Q8WUD4 166 aaPredicted RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 FGD4Q96M96 766 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 TBC1D32Q96NH3 1257 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.49□□□□□ -0.89
RPE-204ENST00000411934 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 ABHD16BQ9H3Z7 469 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
RPE-204ENST00000411934 FLRT1Q9NZU1 646 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 FRMPD3Q5JV73 1810 aa9.49□□□□□ -0.89
RPE-204ENST00000411934 SMCHD1A6NHR9 2005 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 ESYT2A0FGR8 921 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 SEPT4O43236 478 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 PRPF3O43395 683 aaKnown RBP9.48□□□□□ -0.89
RPE-204ENST00000411934 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
RPE-204ENST00000411934 PGK2P07205 417 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 AKR1A1P14550 325 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 CDC27P30260 824 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 ALDH5A1P51649 535 aaPredicted RBP9.48□□□□□ -0.89
RPE-204ENST00000411934 NEK4P51957 841 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 AK2P54819 239 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 SNAP25P60880 206 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 BAATQ14032 418 aaPredicted RBP9.48□□□□□ -0.89
RPE-204ENST00000411934 NTRK3Q16288 839 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 ARMCX2Q7L311 632 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 CCDC148Q8NFR7 591 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 NSUN6Q8TEA1 469 aaKnown RBP9.48□□□□□ -0.89
RPE-204ENST00000411934 CUL5Q93034 780 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 IWS1Q96ST2 819 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 CRISPLD2Q9H0B8 497 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 VAT1LQ9HCJ6 419 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 VTA1Q9NP79 307 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 FRMPD4Q14CM0 1322 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 STK36Q9NRP7 1315 aa9.48□□□□□ -0.89
RPE-204ENST00000411934 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 GCOM1H8Y6P7 765 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 CPLX1O14810 134 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 OPLAHO14841 1288 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 ST18O60284 1047 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 PFKFB2O60825 505 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 STAM2O75886 525 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 SGPL1O95470 568 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 POLR2MP0CAP2 368 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 CYP2C19P33261 490 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 MCM2P49736 904 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 RGS19P49795 217 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 AKAP17AQ02040 695 aaKnown RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 MTFR1Q15390 333 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 XRRA1Q6P2D8 792 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 SLC30A10Q6XR72 485 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 SYTL5Q8TDW5 730 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 U2AF1L4Q8WU68 220 aaKnown RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 KIF2CQ99661 725 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 UNC93B1Q9H1C4 597 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 SH3GLB2Q9NR46 395 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 BARHL2Q9NY43 387 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 OGDHLQ9ULD0 1010 aa9.47□□□□□ -0.89
RPE-204ENST00000411934 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 KIAA0100Q14667 2235 aaKnown RBP9.47□□□□□ -0.89
RPE-204ENST00000411934 SOWAHBA6NEL2 793 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPE-204ENST00000411934 DEXIO95424 95 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms