RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 NINJ1Q92982 152 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
LSM5-203ENST00000409782 CHPF2Q9P2E5 772 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 LRP5O75197 1615 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 EXOC5O00471 708 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 KCNQ2O43526 872 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 HCLS1P14317 486 aaPredicted RBP8.03□□□□□ -1.12
LSM5-203ENST00000409782 CCNFP41002 786 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 RRS1Q15050 365 aaKnown RBP8.03□□□□□ -1.12
LSM5-203ENST00000409782 UVSSAQ2YD98 709 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 SLC10A6Q3KNW5 377 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 UNC5AQ6ZN44 842 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 CYFIP1Q7L576 1253 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 C12orf50Q8NA57 414 aaPredicted RBP8.03□□□□□ -1.12
LSM5-203ENST00000409782 MARCH10Q8NA82 808 aaPredicted RBP8.03□□□□□ -1.12
LSM5-203ENST00000409782 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
LSM5-203ENST00000409782 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 POLR3GLQ9BT43 218 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 TMPRSS13Q9BYE2 586 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 REV1Q9UBZ9 1251 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 MEGF6O75095 1541 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
LSM5-203ENST00000409782 SLC22A31A6NKX4 558 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 SUSD5O60279 629 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 ACRP10323 421 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 LRFN4Q6PJG9 635 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 LTV1Q96GA3 475 aaPredicted RBP8.02□□□□□ -1.13
LSM5-203ENST00000409782 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 CAMKK2Q96RR4 588 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 UBL7Q96S82 380 aaPredicted RBP8.02□□□□□ -1.13
LSM5-203ENST00000409782 SUGCTQ9HAC7 445 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 RAD18Q9NS91 495 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 CD2APQ9Y5K6 639 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 SHANK3Q9BYB0 1731 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 KIF7Q2M1P5 1343 aa8.02□□□□□ -1.13
LSM5-203ENST00000409782 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 DLGAP3O95886 979 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 FAM153BP0C7A2 387 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 FBLN1P23142 703 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 PMLP29590 882 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 STAT3P40763 770 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 PDE3AQ14432 1141 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 EZH2Q15910 746 aaKnown RBP8.01□□□□□ -1.13
LSM5-203ENST00000409782 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 THNSL2Q86YJ6 484 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 SMG8Q8ND04 991 aaKnown RBP8.01□□□□□ -1.13
LSM5-203ENST00000409782 UTP4Q969X6 686 aaKnown RBP8.01□□□□□ -1.13
LSM5-203ENST00000409782 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 PANK3Q9H999 370 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 RGPD2P0DJD1 1756 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 LTBP3Q9NS15 1303 aa8.01□□□□□ -1.13
LSM5-203ENST00000409782 PLSCR1O15162 318 aa8□□□□□ -1.13
LSM5-203ENST00000409782 DHX15O43143 795 aaKnown RBP8□□□□□ -1.13
LSM5-203ENST00000409782 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
LSM5-203ENST00000409782 NAT2P11245 290 aa8□□□□□ -1.13
LSM5-203ENST00000409782 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
LSM5-203ENST00000409782 BBS9Q3SYG4 887 aa8□□□□□ -1.13
LSM5-203ENST00000409782 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
LSM5-203ENST00000409782 NIM1KQ8IY84 436 aa8□□□□□ -1.13
LSM5-203ENST00000409782 CHAC2Q8WUX2 184 aa8□□□□□ -1.13
LSM5-203ENST00000409782 KLHL6Q8WZ60 621 aa8□□□□□ -1.13
LSM5-203ENST00000409782 FAM46AQ96IP4 442 aaKnown RBP8□□□□□ -1.13
LSM5-203ENST00000409782 ZNF214Q9UL59 606 aaPredicted RBP8□□□□□ -1.13
LSM5-203ENST00000409782 FAN1Q9Y2M0 1017 aa8□□□□□ -1.13
LSM5-203ENST00000409782 PKD1L3Q7Z443 1732 aa8□□□□□ -1.13
LSM5-203ENST00000409782 WASHC2AQ641Q2 1341 aa8□□□□□ -1.13
LSM5-203ENST00000409782 PLCG1P19174 1290 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 CDK8P49336 464 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 SLC7A5Q01650 507 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 INPP5AQ14642 412 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 ZYXQ15942 572 aaKnown RBP7.99□□□□□ -1.13
LSM5-203ENST00000409782 FNDC3BQ53EP0 1204 aaKnown RBP7.99□□□□□ -1.13
LSM5-203ENST00000409782 DOT1LQ8TEK3 1739 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 KIF2CQ99661 725 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 SEMA6BQ9H3T3 888 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 CCDC86Q9H6F5 360 aaKnown RBP7.99□□□□□ -1.13
LSM5-203ENST00000409782 CAAP1Q9H8G2 361 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 HOMER2Q9NSB8 354 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 CORINQ9Y5Q5 1042 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 BTAF1O14981 1849 aa7.99□□□□□ -1.13
LSM5-203ENST00000409782 MAP2P11137 1827 aaKnown RBP7.99□□□□□ -1.13
LSM5-203ENST00000409782 SRCAPQ6ZRS2 3230 aa7.98□□□□□ -1.13
LSM5-203ENST00000409782 AGRPO00253 132 aa7.98□□□□□ -1.13
LSM5-203ENST00000409782 PLD2O14939 933 aa7.98□□□□□ -1.13
LSM5-203ENST00000409782 DYRK3O43781 588 aa7.98□□□□□ -1.13
LSM5-203ENST00000409782 ECEL1O95672 775 aa7.98□□□□□ -1.13
LSM5-203ENST00000409782 POU3F3P20264 500 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms