RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 CHST13Q8NET6 341 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 DNERQ8NFT8 737 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 NAP1L4Q99733 375 aaKnown RBP5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 CCSER1Q9C0I3 900 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 MKNK2Q9HBH9 465 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 PDLIM7Q9NR12 457 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 NRBP1Q9UHY1 535 aa5.59□□□□□ -1.51
R3HDM1-203ENST00000409606 USP17L15C9J2P7 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L13C9JLJ4 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L11C9JVI0 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L18D6R9N7 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L22D6RA61 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L17D6RBQ6 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L19D6RCP7 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L20D6RJB6 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 MEIS1O00470 390 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 IREB2P48200 963 aaKnown RBP5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 USP17L24Q0WX57 530 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 CDC37Q16543 378 aaPredicted RBP5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 BLIDQ8IZY5 108 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 CCDC148Q8NFR7 591 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 PHKBQ93100 1093 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 PIGSQ96S52 555 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 MYL10Q9BUA6 226 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.52
R3HDM1-203ENST00000409606 ACTN4O43707 911 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 PSMD10O75832 226 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 CMA1P23946 247 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 NAALADL2Q58DX5 795 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 LINC01465Q8N7H1 131 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 BRI3BPQ8WY22 251 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 NAP1L5Q96NT1 182 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 INPP4AQ96PE3 977 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 ALG1Q9BT22 464 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 ORC3Q9UBD5 711 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 FAM196BA6NMK8 535 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 GDF11O95390 407 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 BMP15O95972 392 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 FOSP01100 380 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 KRT2P35908 639 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 EAPPQ56P03 285 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 OLFML2BQ68BL8 750 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 SHC4Q6S5L8 630 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 KRT25Q7Z3Z0 450 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 CHURC1Q8WUH1 139 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 ZKSCAN4Q969J2 545 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 DCPSQ96C86 337 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 IWS1Q96ST2 819 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 SMC3Q9UQE7 1217 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 KIF26AQ9ULI4 1882 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 PTPRDP23468 1912 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 SRCAPQ6ZRS2 3230 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 ERICH2A1L162 156 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 DLL1O00548 723 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 GNRH1P01148 92 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 APPP05067 770 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 GTF2A2P52657 109 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 TCP10Q12799 353 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 NFIL3Q16649 462 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 USP48Q86UV5 1035 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 CTCFLQ8NI51 663 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 BICD2Q8TD16 824 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 AFAP1L1Q8TED9 768 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 RRP36Q96EU6 259 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 AK8Q96MA6 479 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 USP28Q96RU2 1077 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 SCAND2PQ9GZW5 306 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 GOLPH3LQ9H4A5 285 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 USP25Q9UHP3 1055 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 GJD2Q9UKL4 321 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 PCDHA2Q9Y5H9 948 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 SYNGAP1Q96PV0 1343 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 IGSF9BQ9UPX0 1349 aa5.58□□□□□ -1.52
R3HDM1-203ENST00000409606 UBE2HP62256 183 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 MRPS9P82933 396 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 FMR1Q06787 632 aaKnown RBP eCLIP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 ENPEPQ07075 957 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 MTMR2Q13614 643 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 CCDC62Q6P9F0 684 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 FAM43BQ6ZT52 329 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 FASTKD5Q7L8L6 764 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 KRT26Q7Z3Y9 468 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 LRRC47Q8N1G4 583 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 CCDC12Q8WUD4 166 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 FERMT2Q96AC1 680 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 MTRQ99707 1265 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 UPF3AQ9H1J1 476 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 CYP39A1Q9NYL5 469 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 ZNF219Q9P2Y4 722 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 KIF3AQ9Y496 699 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 A0A087X0B3 334 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 LGR5O75473 907 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 MYL1P05976 194 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 ARID5BQ14865 1188 aa5.57□□□□□ -1.52
R3HDM1-203ENST00000409606 FAM83BQ5T0W9 1011 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms