RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
GPNMB-203ENST00000409458 CSADQ9Y600 493 aa15.96■□□□□ 0.15
GPNMB-203ENST00000409458 ABCB11O95342 1321 aa15.96■□□□□ 0.15
GPNMB-203ENST00000409458 LOC285556D6RIA3 1793 aa15.96■□□□□ 0.15
GPNMB-203ENST00000409458 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.15
GPNMB-203ENST00000409458 PIK3CDO00329 1044 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 POLR2DO15514 142 aaKnown RBP15.95■□□□□ 0.14
GPNMB-203ENST00000409458 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 KRBA2Q6ZNG9 492 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 PNMA8AQ86V59 439 aaPredicted RBP15.95■□□□□ 0.14
GPNMB-203ENST00000409458 PDILTQ8N807 584 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 PANK2Q9BZ23 570 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 SLC38A10Q9HBR0 1119 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 MRPL11Q9Y3B7 192 aaKnown RBP15.95■□□□□ 0.14
GPNMB-203ENST00000409458 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
GPNMB-203ENST00000409458 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 SASS6Q6UVJ0 657 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 CNNM3Q8NE01 707 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 TBC1D5Q92609 795 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 WNK4Q96J92 1243 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 ELP3Q9H9T3 547 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 TMOD4Q9NZQ9 345 aa15.95■□□□□ 0.14
GPNMB-203ENST00000409458 SPDYE3A6NKU9 549 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 ACTN4O43707 911 aaKnown RBP15.94■□□□□ 0.14
GPNMB-203ENST00000409458 CALCRLQ16602 461 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 SH3D19Q5HYK7 790 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 MCTP2Q6DN12 878 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 CRYGNQ8WXF5 182 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 DHX58Q96C10 678 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 ATG4CQ96DT6 458 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 MTMR9Q96QG7 549 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 RAVER2Q9HCJ3 691 aaKnown RBP15.94■□□□□ 0.14
GPNMB-203ENST00000409458 SERTAD1Q9UHV2 236 aa15.94■□□□□ 0.14
GPNMB-203ENST00000409458 A0A087WWV3 80 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 FOXN1O15353 648 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 CFBP00751 764 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 FOSP01100 380 aaPredicted RBP15.93■□□□□ 0.14
GPNMB-203ENST00000409458 SREBF1P36956 1147 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 ARHGAP4P98171 946 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 TTLL12Q14166 644 aaPredicted RBP15.93■□□□□ 0.14
GPNMB-203ENST00000409458 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 CPXCR1Q8N123 301 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 KIAA1468Q9P260 1216 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
GPNMB-203ENST00000409458 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
GPNMB-203ENST00000409458 PP2D1A8MPX8 630 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 VWA5AO00534 786 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 GCFC2P16383 781 aaKnown RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 CDC25AP30304 524 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 PNOCQ13519 176 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 ANO6Q4KMQ2 910 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 TEX2Q8IWB9 1127 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 RBM46Q8TBY0 533 aaKnown RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 CLEC4DQ8WXI8 215 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 SOCS7O14512 581 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 ZBED4O75132 1171 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 DSG3P32926 999 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 USP11P51784 963 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 STX1AQ16623 288 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 CATSPERGQ6ZRH7 1159 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 ELOA2Q8IYF1 753 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 REPS2Q8NFH8 660 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 MBOAT7Q96N66 472 aa15.92■□□□□ 0.14
GPNMB-203ENST00000409458 NAP1L4Q99733 375 aaKnown RBP15.92■□□□□ 0.14
GPNMB-203ENST00000409458 A0A0G2JMZ2 1700 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 SPDYE5A6NIY4 337 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 TRAF5O00463 557 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 NFIBO00712 420 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 ALAS1P13196 640 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 TECP42680 631 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 TXKP42681 527 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 MDM2Q00987 491 aaPredicted RBP15.91■□□□□ 0.14
GPNMB-203ENST00000409458 PPATQ06203 517 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 FMR1Q06787 632 aaKnown RBP eCLIP15.91■□□□□ 0.14
GPNMB-203ENST00000409458 E2F4Q16254 413 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 TREML2Q5T2D2 321 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 MOXD1Q6UVY6 613 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 GRAMD1CQ8IYS0 662 aa15.91■□□□□ 0.14
GPNMB-203ENST00000409458 CTDP1Q9Y5B0 961 aaPredicted RBP15.91■□□□□ 0.14
GPNMB-203ENST00000409458 CYP3A7-CYP3A51PA0A087WV96 503 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 IRF6O14896 467 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 FDX1P10109 184 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 CYP3A7P24462 503 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 TXLNAP40222 546 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 HSD17B4P51659 736 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 COG2Q14746 738 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 KARSQ15046 597 aaKnown RBP15.9■□□□□ 0.14
GPNMB-203ENST00000409458 POSTNQ15063 836 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 C11orf57Q6ZUT1 292 aaPredicted RBP15.9■□□□□ 0.14
GPNMB-203ENST00000409458 ARMC9Q7Z3E5 817 aa15.9■□□□□ 0.14
GPNMB-203ENST00000409458 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms