RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 LAD1O00515 517 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 EPHX2P34913 555 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PTPN12Q05209 780 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NOSTRINQ8IVI9 506 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 THEM5Q8N1Q8 247 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NSUN6Q8TEA1 469 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 MYOZ2Q9NPC6 264 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PIK3C2BO00750 1634 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 UQCRHLA0A096LP55 91 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CYP2E1P05181 493 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CCDC175P0C221 793 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 GAP43P17677 238 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 HOXA13P31271 388 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 HSPA4P34932 840 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 MYO1EQ12965 1108 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ARHGAP44Q17R89 818 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CATSPER4Q7RTX7 472 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CEP112Q8N8E3 955 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 RBM46Q8TBY0 533 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PGBD1Q96JS3 809 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NUP58Q9BVL2 599 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 RNF146Q9NTX7 359 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CTTNBP2NLQ9P2B4 639 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ZNF70Q9UC06 446 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 HERC5Q9UII4 1024 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PNPLA6Q8IY17 1366 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 POLR2BP30876 1174 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 HMGCS2P54868 508 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 LACTBP83111 547 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NFX1Q12986 1120 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 MTMR2Q13614 643 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 NEDD9Q14511 834 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 CNGA4Q8IV77 575 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 GANCQ8TET4 914 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 ADARB2Q9NS39 739 aaKnown RBP5.53□□□□□ -1.52
SCN3A-203ENST00000409101 KIAA1024Q9UPX6 916 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 PHLPP2Q6ZVD8 1323 aa5.53□□□□□ -1.52
SCN3A-203ENST00000409101 C19orf81C9J6K1 198 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 HSF2BPO75031 334 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 FDX1P10109 184 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 MYL5Q02045 173 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SEPT2Q15019 361 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 RCSD1Q6JBY9 416 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 MTERF4Q7Z6M4 381 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 COL23A1Q86Y22 540 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 RYBPQ8N488 228 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 OR6J1Q8NGC5 347 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 STMN4Q9H169 189 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SLITRK6Q9H5Y7 841 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 TPCN1Q9ULQ1 816 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 UTYO14607 1347 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SPDYE16A6NNV3 312 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PFKFB2O60825 505 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 KRT10P13645 584 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PTH1RQ03431 593 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 TYRO3Q06418 890 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SPDYE2Q495Y8 402 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SCYL2Q6P3W7 929 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CEP128Q6ZU80 1094 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 RSRC2Q7L4I2 434 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SPATA33Q96N06 139 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 NAP1L3Q99457 506 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PUS7LQ9H0K6 701 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 VPS16Q9H269 839 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 INPP5FQ9Y2H2 1132 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 FRMPD1Q5SYB0 1578 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 DCCP43146 1447 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CYP2D7A0A087X1C5 515 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF233A6NK53 670 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CAMTA2O94983 1202 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 XRCC5P13010 732 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 UBE2SQ16763 222 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF569Q5MCW4 686 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 YAF2Q8IY57 180 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PPM1EQ8WY54 764 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 TTC14Q96N46 770 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CD163L1Q9NR16 1453 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SRGAP2CP0DJJ0 459 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 LONP1P36776 959 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 STAT3P40763 770 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PDE6CP51160 858 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 KLHL40Q2TBA0 621 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 TKFCQ3LXA3 575 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 DPF3Q92784 378 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 RMDN3Q96TC7 470 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 ISCA1Q9BUE6 129 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC94Q9BW85 323 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 TM6SF1Q9BZW5 370 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 RPF1Q9H9Y2 349 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 CDC42BPBQ9Y5S2 1711 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 MTMR1Q13613 665 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 MICALL1Q8N3F8 863 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PAIP2Q9BPZ3 127 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
SCN3A-203ENST00000409101 GUCA1BQ9UMX6 200 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms