RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 CABYRO75952 493 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 NKX3-2P78367 333 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 MDM2Q00987 491 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-203ENST00000409022 TLE2Q04725 743 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 CCSAPQ6IQ19 270 aaPredicted RBP21.54■■□□□ 1.04
PTPN18-203ENST00000409022 TMTC2Q8N394 836 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 TOX2Q96NM4 488 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 LSG1Q9H089 658 aaKnown RBP21.54■■□□□ 1.04
PTPN18-203ENST00000409022 ALPK3Q96L96 1907 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 ASTN1O14525 1302 aa21.54■■□□□ 1.04
PTPN18-203ENST00000409022 PALM3A6NDB9 673 aaPredicted RBP21.53■■□□□ 1.04
PTPN18-203ENST00000409022 PQBP1O60828 265 aaKnown RBP21.53■■□□□ 1.04
PTPN18-203ENST00000409022 ASGR1P07306 291 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 CLTBP09497 229 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 MCM5P33992 734 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 GRM4Q14833 912 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 BRDTQ58F21 947 aaPredicted RBP21.53■■□□□ 1.04
PTPN18-203ENST00000409022 PURBQ96QR8 312 aaKnown RBP21.53■■□□□ 1.04
PTPN18-203ENST00000409022 SEZ6LQ9BYH1 1024 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 MAD2L2Q9UI95 211 aa21.53■■□□□ 1.04
PTPN18-203ENST00000409022 GNEQ9Y223 722 aaKnown RBP21.53■■□□□ 1.04
PTPN18-203ENST00000409022 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 ZBTB5O15062 677 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 DYNC1LI2O43237 492 aaPredicted RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 ADCY6O43306 1168 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 SMPD1P17405 629 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 KIF5BP33176 963 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 FSCN1Q16658 493 aaKnown RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 TAPT1Q6NXT6 567 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 STOX1Q6ZVD7 989 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 MB21D2Q8IYB1 491 aaPredicted RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 STAG2Q8N3U4 1231 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 NSUN6Q8TEA1 469 aaKnown RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 TMEM87BQ96K49 555 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 PDLIM7Q9NR12 457 aa21.52■■□□□ 1.04
PTPN18-203ENST00000409022 MAP3K20Q9NYL2 800 aaKnown RBP21.52■■□□□ 1.04
PTPN18-203ENST00000409022 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.51■■□□□ 1.03
PTPN18-203ENST00000409022 MYADML2A6NDP7 307 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
PTPN18-203ENST00000409022 CDC45O75419 566 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 DUSP28Q4G0W2 176 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 CHST3Q7LGC8 479 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 ANKRD33Q7Z3H0 272 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 SAMD3Q8N6K7 520 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 CTCFLQ8NI51 663 aaPredicted RBP21.51■■□□□ 1.03
PTPN18-203ENST00000409022 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 MAP3K14Q99558 947 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 WDR11Q9BZH6 1224 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 PDGFCQ9NRA1 345 aa21.51■■□□□ 1.03
PTPN18-203ENST00000409022 SLC27A2O14975 620 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 TLR3O15455 904 aaKnown RBP21.5■■□□□ 1.03
PTPN18-203ENST00000409022 PRC1O43663 620 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 DDAH1O94760 285 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 EDNRBP24530 442 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 TROAPQ12815 778 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 PPP2R5BQ15173 497 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 NFXL1Q6ZNB6 911 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 IGDCC4Q8TDY8 1250 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 IWS1Q96ST2 819 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 TMEM39AQ9NV64 488 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 PCDH10Q9P2E7 1040 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 PCDHA1Q9Y5I3 950 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 SMCHD1A6NHR9 2005 aa21.5■■□□□ 1.03
PTPN18-203ENST00000409022 RBM47A0AV96 593 aaKnown RBP21.49■■□□□ 1.03
PTPN18-203ENST00000409022 CCDC69A6NI79 296 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 RAG1P15918 1043 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 GNAQP50148 359 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 CPT1AP50416 773 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 LRIT3Q3SXY7 679 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 HOMER1Q86YM7 354 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 SYTL5Q8TDW5 730 aaPredicted RBP21.49■■□□□ 1.03
PTPN18-203ENST00000409022 MTMR8Q96EF0 704 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 LZTS2Q9BRK4 669 aa21.49■■□□□ 1.03
PTPN18-203ENST00000409022 ARVCFO00192 962 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 CFBP00751 764 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 CALM1P0DP23 149 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 CALM2P0DP24 149 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 CALM3P0DP25 149 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 ANTXR2P58335 489 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 BEX3Q00994 111 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 TTLL4Q14679 1199 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 ARHGEF16Q5VV41 709 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 RMDN3Q96TC7 470 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 RIOX1Q9H6W3 641 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 POLR3EQ9NVU0 708 aa21.48■■□□□ 1.03
PTPN18-203ENST00000409022 DDX49Q9Y6V7 483 aaKnown RBP21.48■■□□□ 1.03
PTPN18-203ENST00000409022 RANBP2P49792 3224 aaKnown RBP21.48■■□□□ 1.03
PTPN18-203ENST00000409022 PNMA6FA0A0J9YX94 578 aa21.47■■□□□ 1.03
PTPN18-203ENST00000409022 KIAA0355O15063 1070 aa21.47■■□□□ 1.03
PTPN18-203ENST00000409022 STXBP2Q15833 593 aa21.47■■□□□ 1.03
PTPN18-203ENST00000409022 ZNF654Q8IZM8 581 aa21.47■■□□□ 1.03
PTPN18-203ENST00000409022 LY9Q9HBG7 655 aa21.47■■□□□ 1.03
PTPN18-203ENST00000409022 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-203ENST00000409022 TRIM43BA6NCK2 446 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 CTAGE5O15320 804 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 SMARCA1P28370 1054 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 LIFRP42702 1097 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms