RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 CLEC4DQ8WXI8 215 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 POLR3EQ9NVU0 708 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 RANBP2P49792 3224 aaKnown RBP10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 LTBP2Q14767 1821 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 KLRF2D3W0D1 207 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 E7EWF7 191 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 KIAA0355O15063 1070 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 KPNA6O60684 536 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 PPP2R5BQ15173 497 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 SEC23AQ15436 765 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 DUSP28Q4G0W2 176 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 BMP2KLQ5H9B9 411 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 SLC30A10Q6XR72 485 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
SNORD88A-201ENST00000408314 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 ARVCFO00192 962 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 ZBTB5O15062 677 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 DYNC1LI2O43237 492 aaPredicted RBP10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 SMPD1P17405 629 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 EDNRBP24530 442 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 KIF5BP33176 963 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 PTH1RQ03431 593 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 FPGSQ05932 587 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 GRM4Q14833 912 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 TAPT1Q6NXT6 567 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 EEPD1Q7L9B9 569 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 TMTC2Q8N394 836 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 IWS1Q96ST2 819 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 WDR11Q9BZH6 1224 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 IL25Q9H293 177 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 RBM8AQ9Y5S9 174 aaKnown RBP10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 ASTN1O14525 1302 aa10.56□□□□□ -0.72
SNORD88A-201ENST00000408314 MYH6P13533 1939 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 MYADML2A6NDP7 307 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 ADCY6O43306 1168 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 DDAH1O94760 285 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 CALM1P0DP23 149 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 CALM2P0DP24 149 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 CALM3P0DP25 149 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 MCM5P33992 734 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 GNAQP50148 359 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 STXBP2Q15833 593 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 CYB5R4Q7L1T6 521 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 OR6J1Q8NGC5 347 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 BADQ92934 168 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 JMJD4Q9H9V9 463 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 VAT1LQ9HCJ6 419 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 ANO2Q9NQ90 1003 aa10.55□□□□□ -0.72
SNORD88A-201ENST00000408314 LCTP09848 1927 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 TRIM43BA6NCK2 446 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 TIMP1P01033 207 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 NEFLP07196 543 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 SUPT20HL2P0C7V6 817 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 CDK7P50613 346 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 BEX3Q00994 111 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 GHRHRQ02643 423 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 PPIGQ13427 754 aaKnown RBP eCLIP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 ITGA7Q13683 1181 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 ARHGEF16Q5VV41 709 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 CXCL17Q6UXB2 119 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 TMEM199Q8N511 208 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 SYTL5Q8TDW5 730 aaPredicted RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 TRIM43Q96BQ3 446 aaPredicted RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 ESYT1Q9BSJ8 1104 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 MTIF3Q9H2K0 278 aaKnown RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 PDGFCQ9NRA1 345 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 SEC63Q9UGP8 760 aaKnown RBP10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 TBX21Q9UL17 535 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 PCDHA1Q9Y5I3 950 aa10.54□□□□□ -0.72
SNORD88A-201ENST00000408314 CCDC69A6NI79 296 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 SOX1O00570 391 aaPredicted RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 CTAGE5O15320 804 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 CDC45O75419 566 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 CFBP00751 764 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms