RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
TSPAN9-202ENST00000407263 PNMA6FA0A0J9YX94 578 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 OPLAHO14841 1288 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 CFBP00751 764 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 GJB1P08034 283 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 KCNA4P22459 653 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 GJA8P48165 433 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 ALDH5A1P51649 535 aaPredicted RBP11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 STK3Q13188 491 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 TBC1D5Q92609 795 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 LZTS2Q9BRK4 669 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
TSPAN9-202ENST00000407263 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 SNAI1O95863 264 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 IGHA2P01877 340 aa11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 HOXA13P31271 388 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
TSPAN9-202ENST00000407263 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 SGPL1O95470 568 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 TFRCP02786 760 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 RCAN1P53805 252 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 AK2P54819 239 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 MAMDC4Q6UXC1 1216 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 MCF2L2Q86YR7 1114 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 SYTL5Q8TDW5 730 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 PHKBQ93100 1093 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 C22orf23Q9BZE7 217 aa11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-202ENST00000407263 ASB14A6NK59 587 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 SEPT4O43236 478 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 ADCY6O43306 1168 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 DTNBO60941 627 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 LARGE1O95461 756 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 EIF2AK2P19525 551 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 PTGS1P23219 599 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 NEK4P51957 841 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 FUT2Q10981 343 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 FCHSD1Q86WN1 690 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 FBXL16Q8N461 479 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 MSL3Q8N5Y2 521 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
TSPAN9-202ENST00000407263 CCDC196A0A1B0GTZ2 297 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 AKR1A1P14550 325 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 HSD17B4P51659 736 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 NAPAP54920 295 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 PDE4DQ08499 809 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 ACVR2BQ13705 512 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 UBE2SQ16763 222 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 IL17RAQ96F46 866 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 ABHD16BQ9H3Z7 469 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 UPF2Q9HAU5 1272 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
TSPAN9-202ENST00000407263 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 STXBP3O00186 592 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 CPLX1O14810 134 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 MSCO60682 206 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 RARBP10826 455 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 EVCP57679 992 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 TRAF1Q13077 416 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 LHX8Q68G74 356 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 USP17L6PQ6QN14 398 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 IL31RAQ8NI17 732 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 PXMP2Q9NR77 195 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 PDGFCQ9NRA1 345 aa11.85□□□□□ -0.51
TSPAN9-202ENST00000407263 NRBP1Q9UHY1 535 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms