RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 RRP36Q96EU6 259 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 CXorf56Q9H5V9 222 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 ATP1A1P05023 1023 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 MAP2K2P36507 400 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 CDK8P49336 464 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 C2orf54Q08AI8 447 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 TBC1D8BQ0IIM8 1120 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 MAP9Q49MG5 647 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 CYP26C1Q6V0L0 522 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 COA7Q96BR5 231 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 ACBD3Q9H3P7 528 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 YY1AP1Q9H869 796 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 GOLGA6CA6NDK9 693 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 EBAG9O00559 213 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 GOLGA6DP0CG33 693 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 PLCG1P19174 1290 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 GNGT1P63211 74 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 HNRNPLLQ8WVV9 542 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 ABHD10Q9NUJ1 306 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 TMEM260Q9NX78 707 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 GOLGA6AQ9NYA3 693 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
ATG4B-206ENST00000405546 SH2D3CQ8N5H7 860 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 HPCAL4Q9UM19 191 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 FRMD3A2A2Y4 597 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 TNNI2P48788 182 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 GTF2IP78347 998 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 NONOQ15233 471 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■□□ 14.8
ATG4B-206ENST00000405546 BANK1Q8NDB2 785 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 ZHX3Q9H4I2 956 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 NID2Q14112 1375 aa16.73■□□□□ 0.27
ATG4B-206ENST00000405546 A0A087WUV0 522 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 MACROD2A1Z1Q3 448 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 ARL6IP4Q66PJ3 421 aaKnown RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 SND1Q7KZF4 910 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 FAM76AQ8TAV0 307 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 NAA15Q9BXJ9 866 aaKnown RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 H7C1D1 291 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 FGRP09769 529 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GPSM2P81274 684 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 PDCLQ13371 301 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GRAPQ13588 217 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 CEP95Q96GE4 821 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GBP3Q9H0R5 595 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 CD248Q9HCU0 757 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 EPN1Q9Y6I3 576 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-206ENST00000405546 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 FCER1AP12319 257 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 RASA1P20936 1047 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GRM4Q14833 912 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 CCDC122Q5T0U0 273 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 KIRREL3Q8IZU9 778 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 JADE2Q9NQC1 790 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 GGA1Q9UJY5 639 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 COL4A1P02462 1669 aa16.72■□□□□ 0.27
ATG4B-206ENST00000405546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
ATG4B-206ENST00000405546 ATP2C2O75185 946 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 GNA11P29992 359 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 INPP5BP32019 993 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.27
ATG4B-206ENST00000405546 RNF187Q5TA31 235 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-206ENST00000405546 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 OR8K1Q8NGG5 319 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 HDAC7Q8WUI4 952 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 CD209Q9NNX6 404 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 EHD2Q9NZN4 543 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 DUSP10Q9Y6W6 482 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 OR52Z1P0C646 297 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 IRAK1P51617 712 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 CCDC96Q2M329 555 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 CCDC91Q7Z6B0 441 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 NOC4LQ9BVI4 516 aaKnown RBP16.71■□□□□ 0.27
ATG4B-206ENST00000405546 USP21Q9UK80 565 aa16.71■□□□□ 0.27
ATG4B-206ENST00000405546 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
ATG4B-206ENST00000405546 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 TM4SF1P30408 202 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 CXCR5P32302 372 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 KLK7P49862 253 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.26
ATG4B-206ENST00000405546 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.26
ATG4B-206ENST00000405546 STXBP3O00186 592 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms