RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 LPIN2Q92539 896 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 CNOT10Q9H9A5 744 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 MTUS1Q9ULD2 1270 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 LMTK2Q8IWU2 1503 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 CETN3O15182 167 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 SUN1O94901 812 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 GUCY1A2P33402 732 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 TRAPPC10P48553 1259 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 BIRC3Q13489 604 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 INF2Q27J81 1249 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 NELFCDQ8IXH7 590 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 SYCE1Q8N0S2 351 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 RNPC3Q96LT9 517 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 KLHL14Q9P2G3 628 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 TBX22Q9Y458 520 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ERBB3P21860 1342 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 A0A1W2PQC6 194 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 PGRMC1O00264 195 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 HDLBPQ00341 1268 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 CETN1Q12798 172 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 MAN2A1Q16706 1144 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 CCDC65Q8IXS2 484 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 CCDC13Q8IYE1 715 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 STAG1Q8WVM7 1258 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 RRP36Q96EU6 259 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
HDAC9-202ENST00000405010 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 LY9Q9HBG7 655 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 SMARCAL1Q9NZC9 954 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
HDAC9-202ENST00000405010 ABCA9Q8IUA7 1624 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 A0A0U1RQJ8 604 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 FAM107AO95990 144 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 TNNI2P48788 182 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 MAGOHP61326 146 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SLMAPQ14BN4 828 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 TAF11Q15544 211 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 PTGISQ16647 500 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 CCHCR1Q8TD31 782 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SDR42E1Q8WUS8 393 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 MAGOHBQ96A72 148 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 KAZALD1Q96I82 304 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 YIPF3Q9GZM5 350 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 MCM9Q9NXL9 1143 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 TBC1D7Q9P0N9 293 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 AMFRQ9UKV5 643 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SETD1BQ9UPS6 1966 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 STX2P32856 288 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 ZNF76P36508 570 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SMTNP53814 917 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 CUL1Q13616 776 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 RUBCNQ92622 972 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 P3H4Q92791 437 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 ARHGEF2Q92974 986 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 STMN2Q93045 179 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 NDST4Q9H3R1 872 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 AGPAT5Q9NUQ2 364 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 NEDD4P46934 1319 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 NEXMIFQ5QGS0 1516 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 NEURL4Q96JN8 1562 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 TBCAO75347 108 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 H2AFZP0C0S5 128 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SCP2P22307 547 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 IRX1P78414 480 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 NONOQ15233 471 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SEL1L2Q5TEA6 688 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 CAPRIN2Q6IMN6 1127 aaKnown RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 H2AFVQ71UI9 128 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 MMGT1Q8N4V1 131 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 MYCBPAPQ8TBZ2 947 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 SNX29Q8TEQ0 813 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 CYFIP2Q96F07 1278 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 RAB3IPQ96QF0 476 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-202ENST00000405010 FAM114A2Q9NRY5 505 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 CPDO75976 1380 aa8.12□□□□□ -1.11
HDAC9-202ENST00000405010 FAM170AA1A519 330 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 PALMO75781 387 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 SYF2O95926 243 aaKnown RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 MUM1Q2TAK8 710 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 HERC4Q5GLZ8 1057 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 SGMS1Q86VZ5 419 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 TMEM139Q8IV31 216 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 ELOA2Q8IYF1 753 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 AP1M1Q9BXS5 423 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-202ENST00000405010 ABCC12Q96J65 1359 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 PRKAB2O43741 272 aa8.11□□□□□ -1.11
HDAC9-202ENST00000405010 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms