RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 USP17L6PQ6QN14 398 aa18.04■□□□□ 0.48
CDPF1-204ENST00000404744 PLEKHH3Q7Z736 793 aa18.04■□□□□ 0.48
CDPF1-204ENST00000404744 DIS3L2Q8IYB7 885 aaKnown RBP18.04■□□□□ 0.48
CDPF1-204ENST00000404744 REXO1Q8N1G1 1221 aaKnown RBP18.04■□□□□ 0.48
CDPF1-204ENST00000404744 DAGLBQ8NCG7 672 aa18.04■□□□□ 0.48
CDPF1-204ENST00000404744 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
CDPF1-204ENST00000404744 BIN2Q9UBW5 565 aaPredicted RBP18.04■□□□□ 0.48
CDPF1-204ENST00000404744 SPDYE3A6NKU9 549 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 GPR25O00155 361 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 HOXA13P31271 388 aaPredicted RBP18.03■□□□□ 0.48
CDPF1-204ENST00000404744 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
CDPF1-204ENST00000404744 UBE2SQ16763 222 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 GPR142Q7Z601 462 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 TBC1D5Q92609 795 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 A1CFQ9NQ94 594 aaKnown RBP18.03■□□□□ 0.48
CDPF1-204ENST00000404744 WBP1LQ9NX94 342 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 PIK3CDO00329 1044 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 TNPO2O14787 897 aaKnown RBP18.03■□□□□ 0.48
CDPF1-204ENST00000404744 OPLAHO14841 1288 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 FCGRTP55899 365 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 RPS6P62753 249 aaKnown RBP18.03■□□□□ 0.48
CDPF1-204ENST00000404744 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 FCHSD1Q86WN1 690 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 EHMT1Q9H9B1 1298 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 CYP39A1Q9NYL5 469 aa18.03■□□□□ 0.48
CDPF1-204ENST00000404744 CCDC194A0A1B0GVG4 234 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 BTBD18B2RXH4 712 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 POTEB2H3BUK9 544 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 MEIS2O14770 477 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 FOSP01100 380 aaPredicted RBP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 PTPREP23469 700 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 PSMC4P43686 418 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 HSD17B4P51659 736 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 NUCB2P80303 420 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 LACTBP83111 547 aaPredicted RBP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 AP3B2Q13367 1082 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 ARHGEF6Q15052 776 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 ABRAQ8N0Z2 381 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.47
CDPF1-204ENST00000404744 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 PCDHA8Q9Y5H6 950 aa18.02■□□□□ 0.47
CDPF1-204ENST00000404744 FKTNO75072 461 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 GHRHRQ02643 423 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 SLC30A10Q6XR72 485 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 SYTL5Q8TDW5 730 aaPredicted RBP18.01■□□□□ 0.47
CDPF1-204ENST00000404744 TMEM260Q9NX78 707 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 SLC5A4Q9NY91 659 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 MTMR6Q9Y217 621 aa18.01■□□□□ 0.47
CDPF1-204ENST00000404744 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 CLK2P49760 499 aaKnown RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 NR5A1Q13285 461 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 NPY5RQ15761 445 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 NOM1Q5C9Z4 860 aaKnown RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 COL13A1Q5TAT6 717 aaPredicted RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 FOXD4L5Q5VV16 416 aaPredicted RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 DPP9Q86TI2 863 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 RASGRP4Q8TDF6 673 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 OXER1Q8TDS5 423 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 FOXD4L4Q8WXT5 416 aaPredicted RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 ERO1AQ96HE7 468 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 TSKSQ9UJT2 592 aa18■□□□□ 0.47
CDPF1-204ENST00000404744 CIZ1Q9ULV3 898 aaPredicted RBP18■□□□□ 0.47
CDPF1-204ENST00000404744 SMCHD1A6NHR9 2005 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
CDPF1-204ENST00000404744 HOXD10P28358 340 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 ADORA2AP29274 412 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 NONOQ15233 471 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDPF1-204ENST00000404744 ARHGEF16Q5VV41 709 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
CDPF1-204ENST00000404744 ZSCAN16Q9H4T2 348 aaPredicted RBP17.99■□□□□ 0.47
CDPF1-204ENST00000404744 ADD3Q9UEY8 706 aaKnown RBP17.99■□□□□ 0.47
CDPF1-204ENST00000404744 B4DLN1 442 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 PGK2P07205 417 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.47
CDPF1-204ENST00000404744 GRB14Q14449 540 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 NOSTRINQ8IVI9 506 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 ZNF296Q8WUU4 475 aaPredicted RBP17.98■□□□□ 0.47
CDPF1-204ENST00000404744 SOCS4Q8WXH5 440 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 TAAR1Q96RJ0 339 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 RMDN3Q96TC7 470 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 MPHOSPH6Q99547 160 aaKnown RBP17.98■□□□□ 0.47
CDPF1-204ENST00000404744 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 CHMP5Q9NZZ3 219 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 M0R2N6 131 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 ADAMTS3O15072 1205 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 BRAPQ7Z569 592 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 DNERQ8NFT8 737 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 CD99L2Q8TCZ2 262 aa17.98■□□□□ 0.47
CDPF1-204ENST00000404744 NSUN6Q8TEA1 469 aaKnown RBP17.98■□□□□ 0.47
CDPF1-204ENST00000404744 NOL7Q9UMY1 257 aaKnown RBP17.98■□□□□ 0.47
CDPF1-204ENST00000404744 KIF28PB7ZC32 967 aa17.97■□□□□ 0.47
CDPF1-204ENST00000404744 BRD1O95696 1058 aa17.97■□□□□ 0.47
CDPF1-204ENST00000404744 F13A1P00488 732 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms