RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MTA3Q9BTC8 594 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 MRPL11Q9Y3B7 192 aaKnown RBP21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 RIOX1Q9H6W3 641 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 COL20A1Q9P218 1284 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 PHF24Q9UPV7 400 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 ATP11BQ9Y2G3 1177 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 PCDHA1Q9Y5I3 950 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 SLC12A7Q9Y666 1083 aa21.1■□□□□ 0.97
PTPRN2-204ENST00000404321 CFBP00751 764 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 CPA1P15085 419 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 SMPD1P17405 629 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 LIFRP42702 1097 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 RTP1P59025 263 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 PDE4DQ08499 809 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 TAPT1Q6NXT6 567 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 SLC39A5Q6ZMH5 540 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 MCF2L2Q86YR7 1114 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 CMTR1Q8N1G2 835 aaKnown RBP21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 TMTC2Q8N394 836 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 RGS22Q8NE09 1264 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 SYTL5Q8TDW5 730 aaPredicted RBP21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 MORC4Q8TE76 937 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 TAAR1Q96RJ0 339 aa21.09■□□□□ 0.97
PTPRN2-204ENST00000404321 OPLAHO14841 1288 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 PLEKHA8P1O95397 391 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 KIF5BP33176 963 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 KRT32Q14532 448 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 KCNA10Q16322 511 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 TSGA10IPQ3SY00 556 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 TRIM60Q495X7 471 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 DHX32Q7L7V1 743 aaKnown RBP21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 MICU3Q86XE3 530 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 VTA1Q9NP79 307 aa21.08■□□□□ 0.96
PTPRN2-204ENST00000404321 MCM3APO60318 1980 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 A0A1W2PQ45 241 aaPredicted RBP21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 A0A1W2PQY0 241 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 REC8O95072 547 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 HSPA4P34932 840 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 ACLYP53396 1101 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 BEX3Q00994 111 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 TLK2Q86UE8 772 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 KLHDC9Q8NEP7 349 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 DNERQ8NFT8 737 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 SPC25Q9HBM1 224 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 SNX14Q9Y5W7 946 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 ALPK3Q96L96 1907 aa21.07■□□□□ 0.96
PTPRN2-204ENST00000404321 LCTP09848 1927 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 PNMA6FA0A0J9YX94 578 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 DYNC1LI2O43237 492 aaPredicted RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 HOXA13P31271 388 aaPredicted RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 GJA9P57773 515 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 EXOSC10Q01780 885 aaKnown RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 GNASQ5JWF2 1037 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 CCDC82Q8N4S0 544 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 SRBD1Q8N5C6 995 aaKnown RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 JAKMIP1Q96N16 626 aaKnown RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 MAP3K14Q99558 947 aa21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 UPF3AQ9H1J1 476 aaKnown RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 GNEQ9Y223 722 aaKnown RBP21.06■□□□□ 0.96
PTPRN2-204ENST00000404321 CTAGE5O15320 804 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 CALM1P0DP23 149 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 CALM2P0DP24 149 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 CALM3P0DP25 149 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 EIF2AK2P19525 551 aaKnown RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 EDNRBP24530 442 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 HABP4Q5JVS0 413 aaKnown RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 IQSEC1Q6DN90 963 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 CCSAPQ6IQ19 270 aaPredicted RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 RRP36Q96EU6 259 aaKnown RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 RMDN3Q96TC7 470 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 MPHOSPH6Q99547 160 aaKnown RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 WDR11Q9BZH6 1224 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 AP5M1Q9H0R1 490 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 BRPF3Q9ULD4 1205 aa21.05■□□□□ 0.96
PTPRN2-204ENST00000404321 hCG_1642624A0A1W2PR95 340 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 ASGR1P07306 291 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 SYNE3Q6ZMZ3 975 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 SGMS1Q86VZ5 419 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 KCNB2Q92953 911 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 TSEN34Q9BSV6 310 aaKnown RBP21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 SPZ1Q9BXG8 430 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 STARD7Q9NQZ5 370 aa21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 NAP1L2Q9ULW6 460 aaPredicted RBP21.04■□□□□ 0.96
PTPRN2-204ENST00000404321 LOC102724159A0A0B4J2E5 919 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 MOXD2PA6NHM9 499 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 CST5P28325 142 aaPredicted RBP21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 GNAQP50148 359 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 HSD17B4P51659 736 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 FGD1P98174 961 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 PWP2Q15269 919 aaKnown RBP21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 ARHGEF16Q5VV41 709 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 APOA5Q6Q788 366 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 VTI1AQ96AJ9 217 aa21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 PRDM5Q9NQX1 630 aaPredicted RBP21.03■□□□□ 0.96
PTPRN2-204ENST00000404321 B4DLN1 442 aa21.02■□□□□ 0.96
PTPRN2-204ENST00000404321 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms