RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 SGSM2O43147 1006 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 CYP21A2P08686 494 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 RPS6P62753 249 aaKnown RBP17.97■□□□□ 0.47
TPM1-207ENST00000403994 SEC23AQ15436 765 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 FSCN1Q16658 493 aaKnown RBP17.97■□□□□ 0.47
TPM1-207ENST00000403994 C9orf50Q5SZB4 431 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 IFIT1BQ5T764 474 aaKnown RBP17.97■□□□□ 0.47
TPM1-207ENST00000403994 Q7L0L9 218 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 TBX21Q9UL17 535 aa17.97■□□□□ 0.47
TPM1-207ENST00000403994 PARP1P09874 1014 aaKnown RBP17.96■□□□□ 0.47
TPM1-207ENST00000403994 EDNRBP24530 442 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 TMEM63BQ5T3F8 832 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 KIAA1217Q5T5P2 1943 aa17.96■□□□□ 0.47
TPM1-207ENST00000403994 RAG1P15918 1043 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 CDK7P50613 346 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 SHHQ15465 462 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 IQSEC1Q6DN90 963 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 AP5M1Q9H0R1 490 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
TPM1-207ENST00000403994 ABCB11O95342 1321 aa17.95■□□□□ 0.46
TPM1-207ENST00000403994 SCN10AQ9Y5Y9 1956 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 ARVCFO00192 962 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
TPM1-207ENST00000403994 TRDNQ13061 729 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 DUSP28Q4G0W2 176 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 FAM126BQ8IXS8 530 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 DNERQ8NFT8 737 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 JMJD4Q9H9V9 463 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 Q9Y3F1 56 aa17.94■□□□□ 0.46
TPM1-207ENST00000403994 PRUNE2Q8WUY3 3088 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
TPM1-207ENST00000403994 DHX16O60231 1041 aaKnown RBP17.93■□□□□ 0.46
TPM1-207ENST00000403994 CABYRO75952 493 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 EPHB4P54760 987 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 FPGSQ05932 587 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 PDE4DQ08499 809 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 MPHOSPH6Q99547 160 aaKnown RBP17.93■□□□□ 0.46
TPM1-207ENST00000403994 WDR11Q9BZH6 1224 aa17.93■□□□□ 0.46
TPM1-207ENST00000403994 BAZ2BQ9UIF8 2168 aaKnown RBP17.92■□□□□ 0.46
TPM1-207ENST00000403994 E7EWF7 191 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
TPM1-207ENST00000403994 FBXO11Q86XK2 927 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 SLC43A3Q8NBI5 491 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 MAF1Q9H063 256 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 COL20A1Q9P218 1284 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 MAD2L2Q9UI95 211 aa17.92■□□□□ 0.46
TPM1-207ENST00000403994 ZEB2O60315 1214 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 TIMP1P01033 207 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 PPP2R5BQ15173 497 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 SCFD2Q8WU76 684 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 MTMR10Q9NXD2 777 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 CHD7Q9P2D1 2997 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
TPM1-207ENST00000403994 GRIN2DO15399 1336 aa17.91■□□□□ 0.46
TPM1-207ENST00000403994 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 TLR3O15455 904 aaKnown RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 PPP1R11O60927 126 aaPredicted RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 CD4P01730 458 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 ANTXR2P58335 489 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 PSMC6P62333 389 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 GRM4Q14833 912 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 SLC35G1Q2M3R5 365 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 OR6J1Q8NGC5 347 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 NCOA7Q8NI08 942 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 TBC1D5Q92609 795 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 RNPC3Q96LT9 517 aaKnown RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 VAT1LQ9HCJ6 419 aa17.9■□□□□ 0.46
TPM1-207ENST00000403994 MRPL11Q9Y3B7 192 aaKnown RBP17.9■□□□□ 0.46
TPM1-207ENST00000403994 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
TPM1-207ENST00000403994 B4DLN1 442 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 OPLAHO14841 1288 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 CPT1AP50416 773 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
TPM1-207ENST00000403994 WTAPQ15007 396 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 SART3Q15020 963 aaKnown RBP17.89■□□□□ 0.45
TPM1-207ENST00000403994 FAM109BQ6ICB4 259 aaPredicted RBP17.89■□□□□ 0.45
TPM1-207ENST00000403994 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 MCF2L2Q86YR7 1114 aa17.89■□□□□ 0.45
TPM1-207ENST00000403994 MB21D2Q8IYB1 491 aaPredicted RBP17.89■□□□□ 0.45
TPM1-207ENST00000403994 AMNQ9BXJ7 453 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms