RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RHOBTB3O94955 611 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 AARSP49588 968 aaKnown RBP eCLIP22.18■■□□□ 1.14
CCDC47-202ENST00000403162 DNM2P50570 870 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 PMS1P54277 932 aaKnown RBP22.18■■□□□ 1.14
CCDC47-202ENST00000403162 CCDC102AQ96A19 550 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 PCDHA4Q9UN74 947 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 JAG2Q9Y219 1238 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 SAR1BQ9Y6B6 198 aa22.18■■□□□ 1.14
CCDC47-202ENST00000403162 TARSL2A2RTX5 802 aaKnown RBP22.17■■□□□ 1.14
CCDC47-202ENST00000403162 CCDC122Q5T0U0 273 aa22.17■■□□□ 1.14
CCDC47-202ENST00000403162 RTKN2Q8IZC4 609 aa22.17■■□□□ 1.14
CCDC47-202ENST00000403162 NLGN2Q8NFZ4 835 aa22.17■■□□□ 1.14
CCDC47-202ENST00000403162 RTFDC1Q9BY42 306 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-202ENST00000403162 DCP1AQ9NPI6 582 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-202ENST00000403162 FAM205AQ6ZU69 1335 aa22.17■■□□□ 1.14
CCDC47-202ENST00000403162 A0A0U1RQG5 324 aaPredicted RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 PSMA7O14818 248 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 ATP1A1P05023 1023 aaKnown RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 MAP9Q49MG5 647 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 GRIPAP1Q4V328 841 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 FAM47AQ5JRC9 791 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 GIMAP8Q8ND71 665 aaPredicted RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 NSUN4Q96CB9 384 aaKnown RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 CRNKL1Q9BZJ0 848 aaKnown RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 TTYH3Q9C0H2 523 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 ATP8A2Q9NTI2 1148 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 G3V3G9 751 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 EVX2Q03828 476 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 CKAP4Q07065 602 aaKnown RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 SBK1Q52WX2 424 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 DCAF8Q5TAQ9 597 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 RCSD1Q6JBY9 416 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 TTI2Q6NXR4 508 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 DTHD1Q6ZMT9 781 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 RETREG2Q8NC44 543 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 KBTBD4Q9NVX7 518 aa22.16■■□□□ 1.14
CCDC47-202ENST00000403162 MAGEC2Q9UBF1 373 aaPredicted RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 ARPP21Q9UBL0 812 aaPredicted RBP22.16■■□□□ 1.14
CCDC47-202ENST00000403162 SNED1Q8TER0 1413 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 M0R2N6 131 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 KRT86O43790 486 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 IL1R1P14778 569 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 CYLC1P35663 651 aaPredicted RBP22.15■■□□□ 1.14
CCDC47-202ENST00000403162 DOK7Q18PE1 504 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 SUPT20HQ8NEM7 779 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 TRIM47Q96LD4 638 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 NUP58Q9BVL2 599 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 CCSER1Q9C0I3 900 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 COA1Q9GZY4 146 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 HDAC6Q9UBN7 1215 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 ENC1O14682 589 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 SOGA3Q5TF21 947 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 SRLQ86TD4 932 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 CCDC170Q8IYT3 715 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 DHTKD1Q96HY7 919 aaPredicted RBP22.15■■□□□ 1.14
CCDC47-202ENST00000403162 MMS19Q96T76 1030 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 BCS1LQ9Y276 419 aa22.15■■□□□ 1.14
CCDC47-202ENST00000403162 MYO1CO00159 1063 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 JAKMIP2Q96AA8 810 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 EXOC1Q9NV70 894 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 MAST2Q6P0Q8 1798 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 MYH1P12882 1939 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 ANO9A1A5B4 782 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 MECOMQ03112 1051 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 KIAA1328Q86T90 577 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 DAGLBQ8NCG7 672 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
CCDC47-202ENST00000403162 MAGEF1Q9HAY2 307 aa22.14■■□□□ 1.13
CCDC47-202ENST00000403162 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 TSPY2A6NKD2 308 aa22.13■■□□□ 1.13
CCDC47-202ENST00000403162 EIF3CLB5ME19 914 aaKnown RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 LAD1O00515 517 aa22.13■■□□□ 1.13
CCDC47-202ENST00000403162 PES1O00541 588 aaKnown RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 BBXQ8WY36 941 aaPredicted RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 EIF3CQ99613 913 aaKnown RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 CUEDC2Q9H467 287 aa22.13■■□□□ 1.13
CCDC47-202ENST00000403162 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
CCDC47-202ENST00000403162 CCDC194A0A1B0GVG4 234 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 UBA7P41226 1012 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 NT5C2P49902 561 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 AOC3Q16853 763 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 WDR66Q8TBY9 1149 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.136e-6■■□□□ 12
CCDC47-202ENST00000403162 PURBQ96QR8 312 aaKnown RBP22.12■■□□□ 1.13
CCDC47-202ENST00000403162 DUSP9Q99956 384 aaKnown RBP22.12■■□□□ 1.13
CCDC47-202ENST00000403162 TUBGCP2Q9BSJ2 902 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 ZNHIT6Q9NWK9 470 aaKnown RBP22.12■■□□□ 1.13
CCDC47-202ENST00000403162 LCMT1Q9UIC8 334 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 RRP15Q9Y3B9 282 aaKnown RBP22.12■■□□□ 1.13
CCDC47-202ENST00000403162 B4DLN1 442 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 PRPHP41219 470 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 ZBED6P86452 979 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 GALNT17Q6IS24 598 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 RASSF8Q8NHQ8 419 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 TMEM60Q9H2L4 133 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 RASSF4Q9H2L5 321 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 FAM204AQ9H8W3 233 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 DBNDD1Q9H9R9 158 aa22.12■■□□□ 1.13
CCDC47-202ENST00000403162 MKRN1Q9UHC7 482 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms