RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ATP1A2P50993 1020 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 DNA2P51530 1060 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 CEP95Q96GE4 821 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
ATG3-202ENST00000402314 FAM169AQ9Y6X4 670 aa15.74■□□□□ 0.11
ATG3-202ENST00000402314 ERCC3P19447 782 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 MFSD14BQ5SR56 506 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 ZNF658Q5TYW1 1059 aaPredicted RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 HDAC7Q8WUI4 952 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 PIGSQ96S52 555 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 MYCBPQ99417 103 aaPredicted RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 MXD3Q9BW11 206 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 FAM107BQ9H098 131 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 GBP3Q9H0R5 595 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 GOLGA6CA6NDK9 693 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 ZEB2O60315 1214 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 CCNT1O60563 726 aaKnown RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 GOLGA6DP0CG33 693 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 CYP27A1Q02318 531 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 UBXN1Q04323 297 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 TCP11X2Q5H9J9 407 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 CCDC122Q5T0U0 273 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 NCAPGQ9BPX3 1015 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 ABHD10Q9NUJ1 306 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 BARHL2Q9NY43 387 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 GOLGA6AQ9NYA3 693 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 UBAP1LF5GYI3 381 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 LONP1P36776 959 aaKnown RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
ATG3-202ENST00000402314 RWDD2AQ9UIY3 292 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 LEMD3Q9Y2U8 911 aa15.73■□□□□ 0.11
ATG3-202ENST00000402314 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 PRPF6O94906 941 aaKnown RBP15.72■□□□□ 0.11
ATG3-202ENST00000402314 CXCR5P32302 372 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 GNGT1P63211 74 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 WHAMMP3Q1A5X7 153 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATG3-202ENST00000402314 LRRC47Q8N1G4 583 aaKnown RBP15.72■□□□□ 0.11
ATG3-202ENST00000402314 FAM212AQ96EL1 285 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 EHD2Q9NZN4 543 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 POLLQ9UGP5 575 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 PLCG1P19174 1290 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 TECP42680 631 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 FAM76AQ8TAV0 307 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 GJA10Q969M2 543 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 SELENOOQ9BVL4 669 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 MED4Q9NPJ6 270 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 GEMIN8Q9NWZ8 242 aaKnown RBP15.72■□□□□ 0.11
ATG3-202ENST00000402314 TTF2Q9UNY4 1162 aaKnown RBP15.72■□□□□ 0.11
ATG3-202ENST00000402314 REXO2Q9Y3B8 237 aaKnown RBP15.72■□□□□ 0.11
ATG3-202ENST00000402314 KIAA1551Q9HCM1 1747 aa15.72■□□□□ 0.11
ATG3-202ENST00000402314 MYO1FO00160 1098 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
ATG3-202ENST00000402314 EBAG9O00559 213 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 PARP1P09874 1014 aaKnown RBP15.71■□□□□ 0.11
ATG3-202ENST00000402314 KLK7P49862 253 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 IRAK1P51617 712 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 USP14P54578 494 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 ATP2B2Q01814 1243 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 ARL6IP4Q66PJ3 421 aaKnown RBP15.71■□□□□ 0.11
ATG3-202ENST00000402314 MMS22LQ6ZRQ5 1243 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 SH2D3CQ8N5H7 860 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 COA7Q96BR5 231 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 FLT1P17948 1338 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 H0YHG0 523 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 KLRC4O43908 158 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 TOM1O60784 492 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 FCER1AP12319 257 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 CCDC178Q5BJE1 867 aa15.71■□□□□ 0.11
ATG3-202ENST00000402314 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.11
ATG3-202ENST00000402314 EPN1Q9Y6I3 576 aaPredicted RBP15.71■□□□□ 0.11
ATG3-202ENST00000402314 AGPSO00116 658 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
ATG3-202ENST00000402314 HNRNPH1P31943 449 aaKnown RBP15.7■□□□□ 0.1
ATG3-202ENST00000402314 PPP4CP60510 307 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 GTF2IP78347 998 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 KIAA1328Q86T90 577 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 TRIM47Q96LD4 638 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 CENPHQ9H3R5 247 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 CAPN7Q9Y6W3 813 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 A0A087WUV0 522 aaPredicted RBP15.7■□□□□ 0.1
ATG3-202ENST00000402314 GOLGA6BA6NDN3 693 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 PDCLQ13371 301 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 MAP9Q49MG5 647 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 ADSSL1Q8N142 457 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 COG1Q8WTW3 980 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 JPH2Q9BR39 696 aaPredicted RBP15.7■□□□□ 0.1
ATG3-202ENST00000402314 SAR1BQ9Y6B6 198 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 TTC26A0AVF1 554 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms