RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 ZNF165P49910 485 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 G2E3Q7L622 706 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 NGDNQ8NEJ9 315 aaKnown RBP8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 XAGE3Q8WTP9 111 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 MEIS3Q99687 375 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 LRRC4CQ9HCJ2 640 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 MIS18AQ9NYP9 233 aa8.26□□□□□ -1.09
CSNK2A1-204ENST00000400227 UPK3BL1B0FP48 263 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 UPK3BL2E5RIL1 263 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 MED26O95402 600 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 HSP90AB1P08238 724 aaKnown RBP8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 ERCC5P28715 1186 aaPredicted RBP8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 SSTR4P31391 388 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 AMPHP49418 695 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 CLCQ05315 142 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 LRP8Q14114 963 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 RAB3GAP1Q15042 981 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 L1TD1Q5T7N2 865 aaKnown RBP8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 LETMD1Q6P1Q0 360 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 GK5Q6ZS86 529 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 HEXIM2Q96MH2 286 aaKnown RBP8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 TSPYL4Q9UJ04 414 aa8.25□□□□□ -1.09
CSNK2A1-204ENST00000400227 AK9Q5TCS8 1911 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 KIAA1324LA8MWY0 1029 aaPredicted RBP8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 SMARCA5O60264 1052 aaPredicted RBP8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 DNAJA2O60884 412 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 CCT4P50991 539 aaKnown RBP8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 THEMISQ8N1K5 641 aaPredicted RBP8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 RIN3Q8TB24 985 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 RASGRP4Q8TDF6 673 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 RTF1Q92541 710 aaKnown RBP8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 GPRASP2Q96D09 838 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 SPATA32Q96LK8 384 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 ACBD3Q9H3P7 528 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 CCSER2Q9H7U1 834 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 MKNK2Q9HBH9 465 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 KLHL3Q9UH77 587 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
CSNK2A1-204ENST00000400227 CHURC1-FNTBB4DL54 471 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 IGF2BP3O00425 579 aaKnown RBP eCLIP8.23□□□□□ -1.092e-8■■■■□ 25.1
CSNK2A1-204ENST00000400227 HOXC9P31274 260 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 GJA8P48165 433 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 RABEP1Q15276 862 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 PRDM5Q9NQX1 630 aaPredicted RBP8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 BABAM1Q9NWV8 329 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 GMIPQ9P107 970 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 RGPD2P0DJD1 1756 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 KDM3BQ7LBC6 1761 aa8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 PHRF1Q9P1Y6 1649 aaKnown RBP8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 SOS1Q07889 1333 aaPredicted RBP8.23□□□□□ -1.09
CSNK2A1-204ENST00000400227 NFAT5O94916 1531 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 MED1Q15648 1581 aaPredicted RBP8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SLC22A31A6NKX4 558 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 HMMRO75330 724 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SDSP20132 328 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SPINK2P20155 84 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 FAM181AQ8N9Y4 354 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 CYB5D2Q8WUJ1 264 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 MAPK8IP1Q9UQF2 711 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 U3KQE9 123 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 PXDNLA1KZ92 1463 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 LMO7Q8WWI1 1683 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SALL3Q9BXA9 1300 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
CSNK2A1-204ENST00000400227 SETD1BQ9UPS6 1966 aaKnown RBP8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 GNAT3A8MTJ3 354 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 HYAL3O43820 417 aaPredicted RBP8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 GNAI2P04899 355 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 KCNA6P17658 529 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 OXCT1P55809 520 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 COL9A2Q14055 689 aaPredicted RBP8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 CLEC17AQ6ZS10 378 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 DTX1Q86Y01 620 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 DNAJB8Q8NHS0 232 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 PPP1R13LQ8WUF5 828 aa8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 TPX2Q9ULW0 747 aaKnown RBP8.21□□□□□ -1.09
CSNK2A1-204ENST00000400227 ZNF142P52746 1687 aaPredicted RBP8.21□□□□□ -1.1
CSNK2A1-204ENST00000400227 GOLGA6L3A6NEY3 463 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 XRCC6P12956 609 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 CCDC30Q5VVM6 783 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 OVOS1Q6IE37 1185 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 CDH24Q86UP0 819 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 FAM43AQ8N2R8 423 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 IL17REQ8NFR9 667 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 PCMTD2Q9NV79 361 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 ZNRF3Q9ULT6 936 aa8.2□□□□□ -1.1
CSNK2A1-204ENST00000400227 CEP131Q9UPN4 1083 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms