RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 TRAK2O60296 914 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-203ENST00000400188 FCER1AP12319 257 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 IFNAR1P17181 557 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 TRIM32Q13049 653 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 BAATQ14032 418 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-203ENST00000400188 HEATR3Q7Z4Q2 680 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 SH3TC2Q8TF17 1288 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 FGD4Q96M96 766 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 MCOLN1Q9GZU1 580 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 GJB4Q9NTQ9 266 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 SLC15A5A6NIM6 579 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 CPLX1O14810 134 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 ST18O60284 1047 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 HOXA13P31271 388 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-203ENST00000400188 DMTNQ08495 405 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 KCTD2Q14681 263 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 TRIB2Q92519 343 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 COL20A1Q9P218 1284 aa11.15□□□□□ -0.62
GABRB3-203ENST00000400188 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
GABRB3-203ENST00000400188 LCTP09848 1927 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
GABRB3-203ENST00000400188 DNAJC25-GNG10A0A024R161 153 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-203ENST00000400188 STRNO43815 780 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 CALML3P27482 149 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 RPS6P62753 249 aaKnown RBP11.14□□□□□ -0.63
GABRB3-203ENST00000400188 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 ZSCAN30Q86W11 494 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 NSUN7Q8NE18 718 aaKnown RBP11.14□□□□□ -0.63
GABRB3-203ENST00000400188 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 TMX3Q96JJ7 454 aa11.14□□□□□ -0.63
GABRB3-203ENST00000400188 ABCB11O95342 1321 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 STXBP3O00186 592 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 CFBP00751 764 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 FDPSP14324 419 aaKnown RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 ZNF792Q3KQV3 632 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 TKFCQ3LXA3 575 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 RNF207Q6ZRF8 634 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 SOCS4Q8WXH5 440 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 DYNC1I1O14576 645 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 ADCY3O60266 1144 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 KIF20AO95235 890 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 GNRH1P01148 92 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 SCG2P13521 617 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 HOXD10P28358 340 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 CYP2C19P33261 490 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 COPB2P35606 906 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 RGS2P41220 211 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 FOSBP53539 338 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 SSRP1Q08945 709 aaKnown RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 UBE2SQ16763 222 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 FAM133AQ8N9E0 248 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 APBA2Q99767 749 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 VPS54Q9P1Q0 977 aa11.13□□□□□ -0.63
GABRB3-203ENST00000400188 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
GABRB3-203ENST00000400188 IRF5Q13568 498 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 FBXO46Q6PJ61 603 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-203ENST00000400188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.12□□□□□ -0.63
GABRB3-203ENST00000400188 SYTL5Q8TDW5 730 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-203ENST00000400188 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
GABRB3-203ENST00000400188 GTPBP4Q9BZE4 634 aaKnown RBP11.12□□□□□ -0.63
GABRB3-203ENST00000400188 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
GABRB3-203ENST00000400188 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 MEIS2O14770 477 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 HOXC6P09630 235 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
GABRB3-203ENST00000400188 GRK4P32298 578 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 NAPAP54920 295 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 UBXN2AP68543 259 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
GABRB3-203ENST00000400188 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-203ENST00000400188 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms