RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
COL25A1-203ENST00000399132 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
COL25A1-203ENST00000399132 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
COL25A1-203ENST00000399132 EHD4Q9H223 541 aa16.92■□□□□ 0.3
COL25A1-203ENST00000399132 VPS16Q9H269 839 aa16.92■□□□□ 0.3
COL25A1-203ENST00000399132 TMX1Q9H3N1 280 aa16.92■□□□□ 0.3
COL25A1-203ENST00000399132 NDUFB10O96000 172 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 ERCC3P19447 782 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 GPATCH4Q5T3I0 446 aaKnown RBP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 DYMQ7RTS9 669 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 NELFBQ8WX92 580 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 CUL5Q93034 780 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 BCCIPQ9P287 314 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 RIOK3O14730 519 aaKnown RBP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 HOXA13P31271 388 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 PMS1P54277 932 aaKnown RBP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 FAM177A1Q8N128 213 aaPredicted RBP16.91■□□□□ 0.3
COL25A1-203ENST00000399132 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 LRWD1Q9UFC0 647 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 MYH4Q9Y623 1939 aa16.91■□□□□ 0.3
COL25A1-203ENST00000399132 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 ASIC1P78348 528 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
COL25A1-203ENST00000399132 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
COL25A1-203ENST00000399132 COL4A5P29400 1685 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 FCER1AP12319 257 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 ERCC5P28715 1186 aaPredicted RBP16.9■□□□□ 0.3
COL25A1-203ENST00000399132 KIAA1755Q5JYT7 1200 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 E4F1Q66K89 784 aaPredicted RBP16.9■□□□□ 0.3
COL25A1-203ENST00000399132 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 RIC8AQ9NPQ8 531 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
COL25A1-203ENST00000399132 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
COL25A1-203ENST00000399132 SSBP05455 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL25A1-203ENST00000399132 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
COL25A1-203ENST00000399132 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 EGFRP00533 1210 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 PAK1Q13153 545 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 MCM6Q14566 821 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
COL25A1-203ENST00000399132 CCDC150Q8NCX0 1101 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 CDK5RAP3Q96JB5 506 aa16.89■□□□□ 0.29
COL25A1-203ENST00000399132 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-203ENST00000399132 MRPL12P52815 198 aaKnown RBP16.88■□□□□ 0.29
COL25A1-203ENST00000399132 PTPN14Q15678 1187 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
COL25A1-203ENST00000399132 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
COL25A1-203ENST00000399132 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
COL25A1-203ENST00000399132 STAT3P40763 770 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 UBXN2AP68543 259 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 PDE4DQ08499 809 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 DGKZQ13574 1117 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
COL25A1-203ENST00000399132 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 IDEP14735 1019 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 ECM1Q16610 540 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 KCNK18Q7Z418 384 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 MRIQ9BWK5 157 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 LAD1O00515 517 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 PRPHP41219 470 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
COL25A1-203ENST00000399132 CXCL9Q07325 125 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 STK4Q13043 487 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 FAM83BQ5T0W9 1011 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 CCSER1Q9C0I3 900 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 MYO3BQ8WXR4 1341 aa16.87■□□□□ 0.29
COL25A1-203ENST00000399132 KLRC4O43908 158 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 BMP3P12645 472 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 FKBP1AP62942 108 aaKnown RBP16.86■□□□□ 0.29
COL25A1-203ENST00000399132 GRB10Q13322 594 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
COL25A1-203ENST00000399132 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 PCNTO95613 3336 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 N4BP3O15049 544 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 NR1I3Q14994 352 aa16.86■□□□□ 0.29
COL25A1-203ENST00000399132 KRT31Q15323 416 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms