RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CALCRLQ16602 461 aa13.23□□□□□ -0.29
COL25A1-202ENST00000399127 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
COL25A1-202ENST00000399127 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
COL25A1-202ENST00000399127 EEF2KMTQ96G04 330 aa13.23□□□□□ -0.29
COL25A1-202ENST00000399127 CCDC17Q96LX7 622 aa13.23□□□□□ -0.29
COL25A1-202ENST00000399127 RMND1Q9NWS8 449 aa13.23□□□□□ -0.29
COL25A1-202ENST00000399127 POTEMA6NI47 508 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 ICA1Q05084 483 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 TC2NQ8N9U0 490 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 AK8Q96MA6 479 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 TAOK3Q9H2K8 898 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
COL25A1-202ENST00000399127 GREB1LQ9C091 1923 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-202ENST00000399127 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 KLRC4O43908 158 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 TMEM139Q8IV31 216 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 CUL5Q93034 780 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 MRIQ9BWK5 157 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 VPS16Q9H269 839 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 GH2P01242 217 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 KRT31Q15323 416 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 IGSF22Q8N9C0 903 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 HPS3Q969F9 1004 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 MTMR9Q96QG7 549 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 BAG1Q99933 345 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-202ENST00000399127 TAB2Q9NYJ8 693 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
COL25A1-202ENST00000399127 CAPN2P17655 700 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 PTGER2P43116 358 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 CNPY4Q8N129 248 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 F5H6K3 240 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 N4BP3O15049 544 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 ASIC1P78348 528 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 KLRC3Q07444 240 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 RBL2Q08999 1139 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
COL25A1-202ENST00000399127 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
COL25A1-202ENST00000399127 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 TRIM9Q9C026 710 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 KCND1Q9NSA2 647 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 COL4A5P29400 1685 aa13.2□□□□□ -0.3
COL25A1-202ENST00000399127 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
COL25A1-202ENST00000399127 FCER1AP12319 257 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 PSEN1P49768 467 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
COL25A1-202ENST00000399127 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 USH1GQ495M9 461 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
COL25A1-202ENST00000399127 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms