RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 GBP1P32455 592 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 PLS1Q14651 629 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 ALS2CLQ60I27 953 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 UHMK1Q8TAS1 419 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 IFNAR2P48551 515 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 LRRC31Q6UY01 552 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 OXER1Q8TDS5 423 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 DPH5Q9H2P9 285 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 PRDX5P30044 214 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 MXRA7P84157 204 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 ACTR5Q9H9F9 607 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 ATP8A2Q9NTI2 1148 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 PXDNQ92626 1479 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 FAM170AA1A519 330 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 B4DLN1 442 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 CYP2D6P10635 497 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 SCNN1DP51172 638 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 CALCOCO2Q13137 446 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 BIRC2Q13490 618 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 PACS2Q86VP3 889 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 CCDC197Q8NCU1 140 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 FOXN1O15353 648 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 RGS16O15492 202 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 BTDP43251 543 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 EHHADHQ08426 723 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 CALCRLQ16602 461 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 DCAF17Q5H9S7 520 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPRD1A-202ENST00000399022 ACTN4O43707 911 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 MECOMQ03112 1051 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 BEND6Q5SZJ8 279 aaPredicted RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 NOA1Q8NC60 698 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 NFU1Q9UMS0 254 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 KCNQ2O43526 872 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 ADCY7P51828 1080 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 KLHL30Q0D2K2 578 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 ZYXQ15942 572 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 CELF1Q92879 486 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 PNKPQ96T60 521 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 NMT2O60551 498 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 DDAH1O94760 285 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 ALDH3A1P30838 453 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 SLC1A4P43007 532 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 KRT31Q15323 416 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 EMBQ6PCB8 327 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 SENP2Q9HC62 589 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 KLC4Q9NSK0 619 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
RPRD1A-202ENST00000399022 IRAK1P51617 712 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 RASSF7Q02833 373 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 FOXR1Q6PIV2 292 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 RBM43Q6ZSC3 357 aaKnown RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 ANKRD42Q8N9B4 389 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 CHMP2AO43633 222 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 CTNND1O60716 968 aaKnown RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 SMIM24O75264 130 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 GUCY1A2P33402 732 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 PDE6BP35913 854 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 ZKSCAN8Q15776 578 aaPredicted RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 USH1GQ495M9 461 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 OGFOD1Q8N543 542 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 DPP8Q6V1X1 898 aaPredicted RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 TC2NQ8N9U0 490 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 VCXQ9H320 206 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 USP17L3A6NCW0 530 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 USP17L4A6NCW7 530 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 MOCS3O95396 460 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 ELF1P32519 619 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 USP17L1Q7RTZ2 530 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 PEX26Q7Z412 305 aa16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
RPRD1A-202ENST00000399022 MEFVO15553 781 aaPredicted RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 RPN1P04843 607 aaKnown RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 FAM133BQ5BKY9 247 aaKnown RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 TBC1D1Q86TI0 1168 aaPredicted RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
RPRD1A-202ENST00000399022 FDPSP14324 419 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms