RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 PURBQ96QR8 312 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 UPF3AQ9H1J1 476 aaKnown RBP15.67■□□□□ 0.1
VCX3A-202ENST00000398729 CPVLQ9H3G5 476 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 STARD7Q9NQZ5 370 aa15.67■□□□□ 0.1
VCX3A-202ENST00000398729 LCTP09848 1927 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 TMEM265A0A087WTH1 108 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 MYADML2A6NDP7 307 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 RAG1P15918 1043 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 CALML3P27482 149 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
VCX3A-202ENST00000398729 USH1GQ495M9 461 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 GNASQ5JWF2 1037 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 CCSAPQ6IQ19 270 aaPredicted RBP15.66■□□□□ 0.1
VCX3A-202ENST00000398729 CYB5R4Q7L1T6 521 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 RALYLQ86SE5 291 aaKnown RBP15.66■□□□□ 0.1
VCX3A-202ENST00000398729 MORC4Q8TE76 937 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 GLT1D1Q96MS3 346 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
VCX3A-202ENST00000398729 LRRC37A2A6NM11 1700 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 PQBP1O60828 265 aaKnown RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 ASGR1P07306 291 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 ALDH5A1P51649 535 aaPredicted RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 SEC23AQ15436 765 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 IQSEC1Q6DN90 963 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 SLC30A10Q6XR72 485 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 KIAA1211Q6ZU35 1233 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 EEPD1Q7L9B9 569 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 ANKRD33Q7Z3H0 272 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 FBXO16Q8IX29 292 aaPredicted RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 ADGRF4Q8IZF3 695 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 NCOA7Q8NI08 942 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 MPHOSPH6Q99547 160 aaKnown RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 TMEM39AQ9NV64 488 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
VCX3A-202ENST00000398729 ELP1O95163 1332 aa15.65■□□□□ 0.1
VCX3A-202ENST00000398729 CHD7Q9P2D1 2997 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 ERICH2A1L162 156 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 DNAJB2P25686 324 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 NKX3-2P78367 333 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 IRX5P78411 483 aaPredicted RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 FPGSQ05932 587 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 SART3Q15020 963 aaKnown RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 TAPT1Q6NXT6 567 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 TLK2Q86UE8 772 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 MAP4K1Q92918 833 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 VTI1AQ96AJ9 217 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 AP5M1Q9H0R1 490 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 PDGFCQ9NRA1 345 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 GNEQ9Y223 722 aaKnown RBP15.64■□□□□ 0.09
VCX3A-202ENST00000398729 ABCB11O95342 1321 aa15.64■□□□□ 0.09
VCX3A-202ENST00000398729 DCDC2CA8MYV0 355 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 B4DLN1 442 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 E7EWF7 191 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 IFIT3O14879 490 aaKnown RBP15.63■□□□□ 0.09
VCX3A-202ENST00000398729 SMPD1P17405 629 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 MRPL12P52815 198 aaKnown RBP15.63■□□□□ 0.09
VCX3A-202ENST00000398729 RGS22Q8NE09 1264 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 DNERQ8NFT8 737 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
VCX3A-202ENST00000398729 MAF1Q9H063 256 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 ZNF576Q9H609 170 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 VAT1LQ9HCJ6 419 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 Q9Y3F1 56 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 RBM8AQ9Y5S9 174 aaKnown RBP15.63■□□□□ 0.09
VCX3A-202ENST00000398729 MROH7Q68CQ1 1323 aa15.63■□□□□ 0.09
VCX3A-202ENST00000398729 MYH6P13533 1939 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 KLRF2D3W0D1 207 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 CTAGE5O15320 804 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 DYNC1LI2O43237 492 aaPredicted RBP15.62■□□□□ 0.09
VCX3A-202ENST00000398729 ZEB2O60315 1214 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 TIMP1P01033 207 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 BEX3Q00994 111 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 PDE4DQ08499 809 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 FSCN1Q16658 493 aaKnown RBP15.62■□□□□ 0.09
VCX3A-202ENST00000398729 QRICH1Q2TAL8 776 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 TJAP1Q5JTD0 557 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 MCF2L2Q86YR7 1114 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 STAG2Q8N3U4 1231 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 JMJD4Q9H9V9 463 aa15.62■□□□□ 0.09
VCX3A-202ENST00000398729 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
VCX3A-202ENST00000398729 REV3LO60673 3130 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
VCX3A-202ENST00000398729 GRXCR1A8MXD5 290 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 PBX2P40425 430 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 CDK7P50613 346 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 WTAPQ15007 396 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 DUSP28Q4G0W2 176 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 RASIP1Q5U651 963 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms