RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MCF2L2Q86YR7 1114 aa29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 GTF3C6Q969F1 213 aa29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 PRPF3O43395 683 aaKnown RBP29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 DDX49Q9Y6V7 483 aaKnown RBP29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 ASTN1O14525 1302 aa29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 SOWAHBA6NEL2 793 aa29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 AKAP17AQ02040 695 aaKnown RBP29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 PKN1Q16512 942 aa29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 CPLX2Q6PUV4 134 aaKnown RBP29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 TRMT44Q8IYL2 757 aaKnown RBP29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 RGS22Q8NE09 1264 aa29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 ABHD8Q96I13 439 aa29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 RNF26Q9BY78 433 aaPredicted RBP29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 DIS3Q9Y2L1 958 aaKnown RBP29.27■■■□□ 2.28
TMEM55B-202ENST00000398020 HOXA13P31271 388 aaPredicted RBP29.26■■■□□ 2.27
TMEM55B-202ENST00000398020 SSRP1Q08945 709 aaKnown RBP29.26■■■□□ 2.27
TMEM55B-202ENST00000398020 PFKFB3Q16875 520 aaPredicted RBP29.26■■■□□ 2.27
TMEM55B-202ENST00000398020 TYW1BQ6NUM6 668 aa29.26■■■□□ 2.27
TMEM55B-202ENST00000398020 ARMC5Q96C12 935 aa29.26■■■□□ 2.27
TMEM55B-202ENST00000398020 CTDNEP1O95476 244 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 SCG2P13521 617 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 ST3GAL1Q11201 340 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 OLFML2BQ68BL8 750 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 TRIM22Q8IYM9 498 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 ZNF333Q96JL9 665 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 COL20A1Q9P218 1284 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 MTFR1Q15390 333 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 SYTL5Q8TDW5 730 aaPredicted RBP29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 TINF2Q9BSI4 451 aa29.25■■■□□ 2.27
TMEM55B-202ENST00000398020 STXBP3O00186 592 aa29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 PRKAR2AP13861 404 aaKnown RBP29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 NAPAP54920 295 aa29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 CACNB2Q08289 660 aaPredicted RBP29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 MFSD14CQ5VZR4 134 aa29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 BARHL2Q9NY43 387 aa29.24■■■□□ 2.27
TMEM55B-202ENST00000398020 CDKL5O76039 1030 aa29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 IGHA2P01877 340 aa29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 HSD17B4P51659 736 aa29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 UBXN2AP68543 259 aa29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 CCDC83Q8IWF9 413 aa29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 RBM27Q9P2N5 1060 aaKnown RBP29.23■■■□□ 2.27
TMEM55B-202ENST00000398020 PRAMEF19Q5SWL8 479 aa29.22■■■□□ 2.27
TMEM55B-202ENST00000398020 ZSCAN31Q96LW9 406 aaPredicted RBP29.22■■■□□ 2.27
TMEM55B-202ENST00000398020 TAAR1Q96RJ0 339 aa29.22■■■□□ 2.27
TMEM55B-202ENST00000398020 MCM3APO60318 1980 aa29.22■■■□□ 2.27
TMEM55B-202ENST00000398020 GCOM1H8Y6P7 765 aaPredicted RBP29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 POLR2MP0CAP2 368 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 USP17L6PQ6QN14 398 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 ZNF467Q7Z7K2 595 aaPredicted RBP29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 PSTPIP2Q9H939 334 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 ALDH5A1P51649 535 aaPredicted RBP29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 GHRHRQ02643 423 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 FCHSD1Q86WN1 690 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 AIFM3Q96NN9 605 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 UNC93B1Q9H1C4 597 aa29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 ADD3Q9UEY8 706 aaKnown RBP29.21■■■□□ 2.27
TMEM55B-202ENST00000398020 hCG_1984214I3L0E3 225 aa29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 MAP3K21Q5TCX8 1036 aa29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 MAMDC4Q6UXC1 1216 aa29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 ARMCX2Q7L311 632 aa29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 ZNF713Q8N859 430 aaPredicted RBP29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 SH2B1Q9NRF2 756 aaPredicted RBP29.2■■■□□ 2.26
TMEM55B-202ENST00000398020 JAK2O60674 1132 aa29.19■■■□□ 2.26
TMEM55B-202ENST00000398020 DEXIO95424 95 aa29.19■■■□□ 2.26
TMEM55B-202ENST00000398020 CCL5P13501 91 aa29.19■■■□□ 2.26
TMEM55B-202ENST00000398020 NSUN7Q8NE18 718 aaKnown RBP29.19■■■□□ 2.26
TMEM55B-202ENST00000398020 VPS54Q9P1Q0 977 aa29.19■■■□□ 2.26
TMEM55B-202ENST00000398020 MEIS2O14770 477 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 SNAI1O95863 264 aaPredicted RBP29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 CCND3P30281 292 aaPredicted RBP29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 UBE2SQ16763 222 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 PPP1R18Q6NYC8 613 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 TRPV1Q8NER1 839 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 SHISA4Q96DD7 197 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 RMDN3Q96TC7 470 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 MAF1Q9H063 256 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 SYNGAP1Q96PV0 1343 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 SMCO2A6NFE2 343 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 MSL3Q8N5Y2 521 aaKnown RBP29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 IL27Q8NEV9 243 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 SMARCC2Q8TAQ2 1214 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 CUL5Q93034 780 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 RNF208Q9H0X6 261 aa29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 MAP3K20Q9NYL2 800 aaKnown RBP29.18■■■□□ 2.26
TMEM55B-202ENST00000398020 ASB14A6NK59 587 aa29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 CCDC85CA6NKD9 419 aa29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 EIF2AK2P19525 551 aaKnown RBP29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 DNERQ8NFT8 737 aa29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 TMX3Q96JJ7 454 aa29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 HMX1Q9NP08 348 aaPredicted RBP29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 ORC3Q9UBD5 711 aaPredicted RBP29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 RPTORQ8N122 1335 aa29.17■■■□□ 2.26
TMEM55B-202ENST00000398020 CYBAP13498 195 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 CNGA1P29973 690 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 ADCY7P51828 1080 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 ARHGEF16Q5VV41 709 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 EEPD1Q7L9B9 569 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 SAMD3Q8N6K7 520 aa29.16■■■□□ 2.26
TMEM55B-202ENST00000398020 CNPY2Q9Y2B0 182 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms