RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SAMSN1Q9NSI8 373 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CNTNAP5Q8WYK1 1306 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 RGPD8O14715 1765 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 PJA2O43164 708 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NTSR2O95665 410 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CYP7A1P22680 504 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 RNASE9P60153 205 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TRAF1Q13077 416 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 PTGDRQ13258 359 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NR5A1Q13285 461 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 IFIT1BQ5T764 474 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 IRF2BP1Q8IU81 584 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 BLIDQ8IZY5 108 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 MREGQ8N565 214 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 FAM212AQ96EL1 285 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TMEM51Q9NW97 253 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 COL22A1Q8NFW1 1626 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NUTM2BA6NNL0 878 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NUTM2EB1AL46 878 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 FANCGO15287 622 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 GFPT2O94808 682 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CASP14P31944 242 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 FXR1P51114 621 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 C6orf163Q5TEZ5 329 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TTI2Q6NXR4 508 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 PSMB7Q99436 277 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TTYH3Q9C0H2 523 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 MRPL44Q9H9J2 332 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 V9GY48 417 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 MAGEB6P1A0A0J9YX57 407 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 TNFRSF8P28908 595 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 P3H4Q92791 437 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 STK24Q9Y6E0 443 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NEDD9Q14511 834 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CASP8Q14790 479 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 DTHD1Q6ZMT9 781 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CROCCP2Q86T23 111 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 NEDD1Q8NHV4 660 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 SYMPKQ92797 1274 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CALR3Q96L12 384 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 CABP5Q9NP86 173 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 UBR2Q8IWV8 1755 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 GOLGA8KD6RF30 607 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 EPB41P11171 864 aaKnown RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 GSTO1P78417 241 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 KIAA0753Q2KHM9 967 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 USP49Q70CQ1 688 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 VPS36Q86VN1 386 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 MAGEB6Q8N7X4 407 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
PTPRD-205ENST00000397611 FEZ2Q9UHY8 353 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-205ENST00000397611 A0A1W2PRG0 241 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 LCA5LO95447 670 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 RC3H1Q5TC82 1133 aaKnown RBP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 LCORLQ8N3X6 602 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TRIM9Q9C026 710 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ZMYND12Q9H0C1 365 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 VPS16Q9H269 839 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ODF2LQ9ULJ1 636 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 CAMTA2O94983 1202 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ALS2CLQ60I27 953 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TMC4Q7Z404 712 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 SECISBP2LQ93073 1101 aaKnown RBP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 VTI1AQ96AJ9 217 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 KCNK9Q9NPC2 374 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 GJB4Q9NTQ9 266 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TPX2Q9ULW0 747 aaKnown RBP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 KCNJ18B7U540 433 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 BAG3O95817 575 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 RXRAP19793 462 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 NLRP5P59047 1200 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 KCNJ12Q14500 433 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TCP11X2Q5H9J9 407 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 RCSD1Q6JBY9 416 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 CNPY4Q8N129 248 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 UBA5Q9GZZ9 404 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TAOK3Q9H2K8 898 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 DCP1AQ9NPI6 582 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 FBXL5Q9UKA1 691 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 SUFUQ9UMX1 484 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 CES2O00748 559 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 KRT13P13646 458 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 BIRC2Q13490 618 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 NONOQ15233 471 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ASAP1Q9ULH1 1129 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 STK38LQ9Y2H1 464 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 RPS8P62241 208 aaKnown RBP6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TNNC1P63316 161 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 MXRA7P84157 204 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ARID5AQ03989 594 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 GRM4Q14833 912 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 CLUL1Q15846 466 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 VWA3BQ502W6 1294 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 TADA2BQ86TJ2 420 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 NYXQ9GZU5 481 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 ANKZF1Q9H8Y5 726 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms