RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
RBM39-205ENST00000397370 CALML3P27482 149 aa18.62■□□□□ 0.57
RBM39-205ENST00000397370 GHRHRQ02643 423 aa18.62■□□□□ 0.57
RBM39-205ENST00000397370 IL27Q8NEV9 243 aa18.62■□□□□ 0.57
RBM39-205ENST00000397370 PURBQ96QR8 312 aaKnown RBP18.62■□□□□ 0.57
RBM39-205ENST00000397370 LIMCH1Q9UPQ0 1083 aa18.62■□□□□ 0.57
RBM39-205ENST00000397370 ASTN1O14525 1302 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 CFBP00751 764 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 CYP2C19P33261 490 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 MTFR1Q15390 333 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 PFKFB3Q16875 520 aaPredicted RBP18.61■□□□□ 0.57
RBM39-205ENST00000397370 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 WWC2Q6AWC2 1192 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
RBM39-205ENST00000397370 MAMDC4Q6UXC1 1216 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 HEATR3Q7Z4Q2 680 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 MSL3Q8N5Y2 521 aaKnown RBP18.61■□□□□ 0.57
RBM39-205ENST00000397370 SAMD3Q8N6K7 520 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 GPKOWQ92917 476 aaPredicted RBP eCLIP18.61■□□□□ 0.571e-6■■□□□ 12.6
RBM39-205ENST00000397370 TINF2Q9BSI4 451 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 SLC26A6Q9BXS9 759 aa18.61■□□□□ 0.57
RBM39-205ENST00000397370 RNF26Q9BY78 433 aaPredicted RBP18.61■□□□□ 0.57
RBM39-205ENST00000397370 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
RBM39-205ENST00000397370 ST18O60284 1047 aa18.6■□□□□ 0.57
RBM39-205ENST00000397370 PPFIA3O75145 1194 aa18.6■□□□□ 0.57
RBM39-205ENST00000397370 MYCP01106 439 aaPredicted RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 PRKAR2AP13861 404 aaKnown RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 HSD17B4P51659 736 aa18.6■□□□□ 0.57
RBM39-205ENST00000397370 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 CACNB2Q08289 660 aaPredicted RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 PKN1Q16512 942 aa18.6■□□□□ 0.57
RBM39-205ENST00000397370 SYTL5Q8TDW5 730 aaPredicted RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 GTF3C6Q969F1 213 aa18.6■□□□□ 0.57
RBM39-205ENST00000397370 MAP3K20Q9NYL2 800 aaKnown RBP18.6■□□□□ 0.57
RBM39-205ENST00000397370 SYNGAP1Q96PV0 1343 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 STXBP3O00186 592 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 CCL5P13501 91 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 SCG2P13521 617 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 ALDH5A1P51649 535 aaPredicted RBP18.59■□□□□ 0.57
RBM39-205ENST00000397370 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
RBM39-205ENST00000397370 UNC93B1Q9H1C4 597 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
RBM39-205ENST00000397370 COL20A1Q9P218 1284 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
RBM39-205ENST00000397370 CENPFP49454 3210 aa18.59■□□□□ 0.57
RBM39-205ENST00000397370 RPTORQ8N122 1335 aa18.58■□□□□ 0.57
RBM39-205ENST00000397370 ASB14A6NK59 587 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 GCOM1H8Y6P7 765 aaPredicted RBP18.58■□□□□ 0.56
RBM39-205ENST00000397370 CDKL5O76039 1030 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 POLR2MP0CAP2 368 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.56
RBM39-205ENST00000397370 NAPAP54920 295 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 ARMCX2Q7L311 632 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 DNERQ8NFT8 737 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
RBM39-205ENST00000397370 TAAR1Q96RJ0 339 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 BARHL2Q9NY43 387 aa18.58■□□□□ 0.56
RBM39-205ENST00000397370 LOC102724159A0A0B4J2E5 919 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 CCDC85CA6NKD9 419 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 CTDNEP1O95476 244 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 SNAI1O95863 264 aaPredicted RBP18.57■□□□□ 0.56
RBM39-205ENST00000397370 CYBAP13498 195 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 CCND3P30281 292 aaPredicted RBP18.57■□□□□ 0.56
RBM39-205ENST00000397370 ST3GAL1Q11201 340 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 PWP2Q15269 919 aaKnown RBP18.57■□□□□ 0.56
RBM39-205ENST00000397370 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 TRPV1Q8NER1 839 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.57■□□□□ 0.565e-6■□□□□ 9.5
RBM39-205ENST00000397370 RNF208Q9H0X6 261 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
RBM39-205ENST00000397370 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.57■□□□□ 0.56
RBM39-205ENST00000397370 LRRC37A2A6NM11 1700 aa18.57■□□□□ 0.56
RBM39-205ENST00000397370 KIAA0100Q14667 2235 aaKnown RBP18.56■□□□□ 0.56
RBM39-205ENST00000397370 PIK3CDO00329 1044 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 MEIS2O14770 477 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 CD2BP2O95400 341 aaKnown RBP18.56■□□□□ 0.56
RBM39-205ENST00000397370 FCHSD1Q86WN1 690 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 MORC4Q8TE76 937 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 CUL5Q93034 780 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 PAK6Q9NQU5 681 aaPredicted RBP18.56■□□□□ 0.56
RBM39-205ENST00000397370 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
RBM39-205ENST00000397370 STK36Q9NRP7 1315 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 DTNBO60941 627 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 DEXIO95424 95 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 NSUN7Q8NE18 718 aaKnown RBP18.55■□□□□ 0.56
RBM39-205ENST00000397370 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
RBM39-205ENST00000397370 RMDN3Q96TC7 470 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 TMEM106CQ9BVX2 250 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 ABHD16BQ9H3Z7 469 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 PXMP2Q9NR77 195 aa18.55■□□□□ 0.56
RBM39-205ENST00000397370 CNPY2Q9Y2B0 182 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms