RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 NOD2Q9HC29 1040 aa10.96□□□□□ -0.65
APTX-207ENST00000397172 GYPCP04921 128 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 RPSAP08865 295 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 PDHBP11177 359 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 NPR1P16066 1061 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 KRT9P35527 623 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 SCTRP47872 440 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 PDE4BQ07343 736 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 KIF5AQ12840 1032 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 CDKAL1Q5VV42 579 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 FAM43BQ6ZT52 329 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 C2CD5Q86YS7 1000 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 KLHL23Q8NBE8 558 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 EAF2Q96CJ1 260 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 TBC1D31Q96DN5 1066 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 CAPZA3Q96KX2 299 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 NUP58Q9BVL2 599 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 RABEP2Q9H5N1 569 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 SUDS3Q9H7L9 328 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 SAMSN1Q9NSI8 373 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 IRAK4Q9NWZ3 460 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 CHCHD3Q9NX63 227 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 LIMA1Q9UHB6 759 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 LAMB2P55268 1798 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 FRMD3A2A2Y4 597 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 E7EWF7 191 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 ATP1A1P05023 1023 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 DPEP1P16444 411 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 KCNA3P22001 575 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 ALDH1B1P30837 517 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 ROR2Q01974 943 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 FMR1Q06787 632 aaKnown RBP eCLIP10.95□□□□□ -0.66
APTX-207ENST00000397172 IFI16Q16666 785 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 C8orf74Q6P047 294 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 BZW1Q7L1Q6 419 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 GSDMAQ96QA5 445 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 LRRC2Q9BYS8 371 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 EHD4Q9H223 541 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 CNOT10Q9H9A5 744 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 NCOA5Q9HCD5 579 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 HAUS2Q9NVX0 235 aa10.95□□□□□ -0.66
APTX-207ENST00000397172 LUC7L2Q9Y383 392 aaKnown RBP10.95□□□□□ -0.66
APTX-207ENST00000397172 C5orf60A6NFR6 353 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 LRRC10BA6NIK2 292 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 GCOM1H8Y6P7 765 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 SASH1O94885 1247 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 RTN3O95197 1032 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 MYZAPP0CAP1 466 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 CCND1P24385 295 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 PEX19P40855 299 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 GCLCP48506 637 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 INHBEP58166 350 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 ERVK-24P63145 666 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 HDLBPQ00341 1268 aaKnown RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 DYNC1I2Q13409 638 aaKnown RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 PTPAQ15257 358 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 CCDC63Q8NA47 563 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 RETREG2Q8NC44 543 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 NLGN2Q8NFZ4 835 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 MIPOL1Q8TD10 442 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 ZFAND2BQ8WV99 257 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 HVCN1Q96D96 273 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 RBM17Q96I25 401 aaKnown RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 GDAP1L1Q96MZ0 367 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 ZIM3Q96PE6 472 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 SEC62Q99442 399 aaKnown RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 TSC22D3Q99576 134 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 PIM2Q9P1W9 311 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 BAIAP2L1Q9UHR4 511 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 HYOU1Q9Y4L1 999 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 TAF6LQ9Y6J9 622 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 DDX60Q8IY21 1712 aaKnown RBP10.94□□□□□ -0.66
APTX-207ENST00000397172 KIAA1551Q9HCM1 1747 aa10.94□□□□□ -0.66
APTX-207ENST00000397172 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
APTX-207ENST00000397172 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
APTX-207ENST00000397172 STXBP3O00186 592 aa10.93□□□□□ -0.66
APTX-207ENST00000397172 TEX33O43247 280 aa10.93□□□□□ -0.66
APTX-207ENST00000397172 PPP1R12BO60237 982 aaPredicted RBP10.93□□□□□ -0.66
APTX-207ENST00000397172 SMNDC1O75940 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
APTX-207ENST00000397172 FLOT1O75955 427 aa10.93□□□□□ -0.66
APTX-207ENST00000397172 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms