RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 OSBP2Q969R2 916 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 NECAB3Q96P71 396 aaPredicted RBP16.07■□□□□ 0.16
SEC13-205ENST00000397101 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
SEC13-205ENST00000397101 RAD50Q92878 1312 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 GBF1Q92538 1859 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 LOC102724159A0A0B4J2E5 919 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 SGSM2O43147 1006 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
SEC13-205ENST00000397101 TFF2Q03403 129 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 PWP2Q15269 919 aaKnown RBP16.06■□□□□ 0.16
SEC13-205ENST00000397101 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 FAM160B2Q86V87 743 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
SEC13-205ENST00000397101 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 CHURC1Q8WUH1 139 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 CEP95Q96GE4 821 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 TRPV6Q9H1D0 765 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
SEC13-205ENST00000397101 HCN4Q9Y3Q4 1203 aa16.06■□□□□ 0.16
SEC13-205ENST00000397101 ZNF536O15090 1300 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 APPP05067 770 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 MYOGP15173 224 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 RFC2P35250 354 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 STAT2P52630 851 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 SLFN13Q68D06 897 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 GMCL1Q96IK5 515 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 SLC9A7Q96T83 725 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 LRFN3Q9BTN0 628 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 RNF146Q9NTX7 359 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 MYH7P12883 1935 aa16.05■□□□□ 0.16
SEC13-205ENST00000397101 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 GPAA1O43292 621 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 TLL1O43897 1013 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 ACTN1P12814 892 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 GNAT2P19087 354 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 KCNQ1P51787 676 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
SEC13-205ENST00000397101 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 SCLYQ96I15 445 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
SEC13-205ENST00000397101 TCF20Q9UGU0 1960 aaKnown RBP16.04■□□□□ 0.16
SEC13-205ENST00000397101 TMEM232C9JQI7 657 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 SEC24BO95487 1268 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 CA3P07451 260 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
SEC13-205ENST00000397101 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 TMEM31Q5JXX7 168 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 MYH4Q9Y623 1939 aa16.03■□□□□ 0.16
SEC13-205ENST00000397101 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 PRRC2BQ5JSZ5 2229 aaKnown RBP16.02■□□□□ 0.16
SEC13-205ENST00000397101 TNKSO95271 1327 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 GPR37L1O60883 481 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 PSMC6P62333 389 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 LRRC47Q8N1G4 583 aaKnown RBP16.02■□□□□ 0.16
SEC13-205ENST00000397101 IL25Q9H293 177 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 EPHX3Q9H6B9 360 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 CYP39A1Q9NYL5 469 aa16.02■□□□□ 0.16
SEC13-205ENST00000397101 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
SEC13-205ENST00000397101 KIF28PB7ZC32 967 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 MCCP23508 829 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 SLC1A4P43007 532 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 CPT1AP50416 773 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
SEC13-205ENST00000397101 TAP1Q03518 808 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 FBXO16Q8IX29 292 aaPredicted RBP16.01■□□□□ 0.15
SEC13-205ENST00000397101 HLA-CQ95604 372 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 NACAP1Q9BZK3 213 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
SEC13-205ENST00000397101 TRMT13Q9NUP7 481 aaKnown RBP16.01■□□□□ 0.15
SEC13-205ENST00000397101 LMCD1Q9NZU5 365 aa16.01■□□□□ 0.15
SEC13-205ENST00000397101 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
SEC13-205ENST00000397101 BAIAP3O94812 1187 aa16■□□□□ 0.15
SEC13-205ENST00000397101 ALAS1P13196 640 aa16■□□□□ 0.15
SEC13-205ENST00000397101 TDO2P48775 406 aa16■□□□□ 0.15
SEC13-205ENST00000397101 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
SEC13-205ENST00000397101 PDE4BQ07343 736 aa16■□□□□ 0.15
SEC13-205ENST00000397101 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
SEC13-205ENST00000397101 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
SEC13-205ENST00000397101 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
SEC13-205ENST00000397101 ADD3Q9UEY8 706 aaKnown RBP16■□□□□ 0.15
SEC13-205ENST00000397101 EPOPA6NHQ4 379 aa15.99■□□□□ 0.15
SEC13-205ENST00000397101 RFXAPO00287 272 aa15.99■□□□□ 0.15
SEC13-205ENST00000397101 KPNA6O60684 536 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms