RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 ABHD16BQ9H3Z7 469 aa11.23□□□□□ -0.61
MCF2L-206ENST00000397021 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 H0YGN5 161 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 DNM1LO00429 736 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 OPLAHO14841 1288 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 EVI5O60447 810 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 CALM1P0DP23 149 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 CALM2P0DP24 149 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 CALM3P0DP25 149 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 CAPN2P17655 700 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
MCF2L-206ENST00000397021 HOXA13P31271 388 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-206ENST00000397021 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 LRRC41Q15345 812 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 APOA5Q6Q788 366 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 BLOC1S2Q6QNY1 142 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
MCF2L-206ENST00000397021 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 MCF2L2Q86YR7 1114 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-206ENST00000397021 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
MCF2L-206ENST00000397021 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
MCF2L-206ENST00000397021 BRCA2P51587 3418 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 GOLGA8AA7E2F4 631 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 KBTBD13C9JR72 458 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 ZBTB43O43298 467 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 ADAMTS4O75173 837 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.61
MCF2L-206ENST00000397021 RPS6KB1P23443 525 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 GNAQP50148 359 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 TNFAIP2Q03169 654 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 PDE4DQ08499 809 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 LRRC26Q2I0M4 334 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
MCF2L-206ENST00000397021 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 RGS22Q8NE09 1264 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 BRF1Q92994 677 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
MCF2L-206ENST00000397021 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
MCF2L-206ENST00000397021 SPZ1Q9BXG8 430 aa11.21□□□□□ -0.61
MCF2L-206ENST00000397021 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
MCF2L-206ENST00000397021 SEC24BO95487 1268 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 SMPD1P17405 629 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 EIF2AK2P19525 551 aaKnown RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 BEX3Q00994 111 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 RTN1Q16799 776 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 RNF180Q86T96 592 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 RMDN3Q96TC7 470 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 LZTS2Q9BRK4 669 aa11.2□□□□□ -0.62
MCF2L-206ENST00000397021 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
MCF2L-206ENST00000397021 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-206ENST00000397021 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 DUSP11O75319 330 aaKnown RBP11.19□□□□□ -0.62
MCF2L-206ENST00000397021 SYN1P17600 705 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 EDNRBP24530 442 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 PSMA5P28066 241 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 CDC27P30260 824 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
MCF2L-206ENST00000397021 HSD17B4P51659 736 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 KCNA10Q16322 511 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 ARHGEF16Q5VV41 709 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 SEPT14Q6ZU15 432 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 DNERQ8NFT8 737 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 NSUN6Q8TEA1 469 aaKnown RBP11.19□□□□□ -0.62
MCF2L-206ENST00000397021 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
MCF2L-206ENST00000397021 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-206ENST00000397021 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 SMARCA1P28370 1054 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 METAP2P50579 478 aaKnown RBP eCLIP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 ACLYP53396 1101 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 GJA9P57773 515 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 SLC39A5Q6ZMH5 540 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 TLK2Q86UE8 772 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 COPS5Q92905 334 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 WDR11Q9BZH6 1224 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms