RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ARMC5Q96C12 935 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 CYP3A7-CYP3A51PA0A087WV96 503 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 CYP3A7P24462 503 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 GALNT17Q6IS24 598 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 TRPV1Q8NER1 839 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 SNAI1O95863 264 aaPredicted RBP12.24□□□□□ -0.45
NUP98-205ENST00000397007 B3GNT9Q6UX72 402 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 COA7Q96BR5 231 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 MMP1P03956 469 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 ADORA2AP29274 412 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 CIITAP33076 1130 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
NUP98-205ENST00000397007 APBA2Q99767 749 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 PCDHA1Q9Y5I3 950 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 CTAGE5O15320 804 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 ZNF865P0CJ78 1059 aaPredicted RBP12.24□□□□□ -0.45
NUP98-205ENST00000397007 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
NUP98-205ENST00000397007 CYBAP13498 195 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 RPS6P62753 249 aaKnown RBP12.24□□□□□ -0.45
NUP98-205ENST00000397007 PRKCZQ05513 592 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 CCDC83Q8IWF9 413 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 TRIB2Q92519 343 aa12.24□□□□□ -0.45
NUP98-205ENST00000397007 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.452e-6■■□□□ 13.9
NUP98-205ENST00000397007 CDKL5O76039 1030 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 SREBF1P36956 1147 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 FCGRTP55899 365 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 CCNA1P78396 465 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 SEMA3FQ13275 785 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 TAPT1Q6NXT6 567 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 MRPL11Q9Y3B7 192 aaKnown RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 ADCY6O43306 1168 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 DHX16O60231 1041 aaKnown RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 MRPS9P82933 396 aaKnown RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 FBXO18Q8NFZ0 1043 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 PXMP2Q9NR77 195 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 PSMC4P43686 418 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 ALDH5A1P51649 535 aaPredicted RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
NUP98-205ENST00000397007 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 GJB4Q9NTQ9 266 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 DNAH12Q6ZR08 3092 aa12.23□□□□□ -0.45
NUP98-205ENST00000397007 ICAM3P32942 547 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
NUP98-205ENST00000397007 HMGN5P82970 282 aaKnown RBP12.22□□□□□ -0.45
NUP98-205ENST00000397007 TRAF1Q13077 416 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 PURBQ96QR8 312 aaKnown RBP12.22□□□□□ -0.45
NUP98-205ENST00000397007 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
NUP98-205ENST00000397007 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 LBX1P52954 281 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 STK3Q13188 491 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 CCDC62Q6P9F0 684 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 KIF28PB7ZC32 967 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 PGM5Q15124 567 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 PCNX4Q63HM2 1172 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 UBE2Q1Q7Z7E8 422 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
NUP98-205ENST00000397007 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 MMP19Q99542 508 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
NUP98-205ENST00000397007 WNT7AO00755 349 aa12.21□□□□□ -0.45
NUP98-205ENST00000397007 CNTN2Q02246 1040 aa12.21□□□□□ -0.45
NUP98-205ENST00000397007 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
NUP98-205ENST00000397007 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
NUP98-205ENST00000397007 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
NUP98-205ENST00000397007 UPF3AQ9H1J1 476 aaKnown RBP12.21□□□□□ -0.45
NUP98-205ENST00000397007 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
NUP98-205ENST00000397007 FCER1AP12319 257 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 PKN2Q16513 984 aaKnown RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 CCSAPQ6IQ19 270 aaPredicted RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 NIPA1Q7RTP0 329 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 INPP4AQ96PE3 977 aaPredicted RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 BAATQ14032 418 aaPredicted RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 CCL14Q16627 93 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 XRRA1Q6P2D8 792 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 OXER1Q8TDS5 423 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 ZNF333Q96JL9 665 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 PAGR1Q9BTK6 254 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.46
NUP98-205ENST00000397007 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.46
NUP98-205ENST00000397007 TAAR1Q96RJ0 339 aa12.2□□□□□ -0.46
NUP98-205ENST00000397007 PDCD2LQ9BRP1 358 aa12.2□□□□□ -0.46
NUP98-205ENST00000397007 GLT8D2Q9H1C3 349 aa12.2□□□□□ -0.46
NUP98-205ENST00000397007 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
NUP98-205ENST00000397007 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
NUP98-205ENST00000397007 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms