RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TRADDQ15628 312 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 MS4A14Q96JA4 679 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 ERGIC2Q96RQ1 377 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 PLAGL2Q9UPG8 496 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
NUP98-204ENST00000397004 PSMA7O14818 248 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 CCNE1P24864 410 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 APBA1Q02410 837 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 PDE4DQ08499 809 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 UBE4AQ14139 1066 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
NUP98-204ENST00000397004 CCDC178Q5BJE1 867 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 HAUS3Q68CZ6 603 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 ZNF572Q7Z3I7 529 aaPredicted RBP15.53■□□□□ 0.08
NUP98-204ENST00000397004 SH3GL2Q99962 352 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 SLC39A2Q9NP94 309 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 FAM207AQ9NSI2 230 aaPredicted RBP15.53■□□□□ 0.08
NUP98-204ENST00000397004 UBA7P41226 1012 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.08
NUP98-204ENST00000397004 CCDC170Q8IYT3 715 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 MMGT1Q8N4V1 131 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
NUP98-204ENST00000397004 PCDHA13Q9Y5I0 950 aa15.53■□□□□ 0.08
NUP98-204ENST00000397004 ANO9A1A5B4 782 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 HNRNPH3P31942 346 aaKnown RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 ASTE1Q2TB18 679 aaPredicted RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 SND1Q7KZF4 910 aaKnown RBP eCLIP15.52■□□□□ 0.08
NUP98-204ENST00000397004 C2CD5Q86YS7 1000 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 BAP1Q92560 729 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 DHTKD1Q96HY7 919 aaPredicted RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 TLR10Q9BXR5 811 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 NUTM2BA6NNL0 878 aaPredicted RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 NUTM2EB1AL46 878 aaPredicted RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 PCP11498 1178 aaKnown RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 EIF4A3P38919 411 aaKnown RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 HEATR3Q7Z4Q2 680 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 SECISBP2LQ93073 1101 aaKnown RBP15.52■□□□□ 0.08
NUP98-204ENST00000397004 OSBPL9Q96SU4 736 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 NUDT12Q9BQG2 462 aa15.52■□□□□ 0.08
NUP98-204ENST00000397004 FAM153BP0C7A2 387 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 FAM153CQ494X1 144 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 PARP10Q53GL7 1025 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 PYM1Q9BRP8 204 aaKnown RBP15.52■□□□□ 0.07
NUP98-204ENST00000397004 BLOC1S4Q9NUP1 217 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 MCM9Q9NXL9 1143 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 BARHL2Q9NY43 387 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 FAM153AQ9UHL3 310 aa15.52■□□□□ 0.07
NUP98-204ENST00000397004 LOC102724428A0A0B4J2F2 783 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 SIK1P57059 783 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CDK17Q00537 523 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 GRM4Q14833 912 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 SBK1Q52WX2 424 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 ANKRD18AQ8IVF6 992 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 RBM12Q9NTZ6 932 aaKnown RBP15.51■□□□□ 0.07
NUP98-204ENST00000397004 FAM184BQ9ULE4 1060 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 LCA5LO95447 670 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CYLC1P35663 651 aaPredicted RBP15.51■□□□□ 0.07
NUP98-204ENST00000397004 TECP42680 631 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CCT5P48643 541 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 HGSNATQ68CP4 663 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CABP7Q86V35 215 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CAGE1Q8TC20 777 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 C7orf25Q9BPX7 421 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 SH3GLB2Q9NR46 395 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 IRS2Q9Y4H2 1338 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CCDC194A0A1B0GVG4 234 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 GOLGA6BA6NDN3 693 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CALML3P27482 149 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 KIF11P52732 1056 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 GFPT1Q06210 699 aaPredicted RBP15.51■□□□□ 0.07
NUP98-204ENST00000397004 CCDC96Q2M329 555 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 CENPPQ6IPU0 288 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 SH2D3CQ8N5H7 860 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 RASSF8Q8NHQ8 419 aa15.51■□□□□ 0.07
NUP98-204ENST00000397004 A0A1W2PQJ5 194 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 TOM1O60784 492 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 ZPR1O75312 459 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 FIGNQ5HY92 759 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 MYMKA6NI61 221 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 TLR2O60603 784 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 GLI1P08151 1106 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 KCNMA1Q12791 1236 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 DNAJC21Q5F1R6 531 aaKnown RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 DAGLBQ8NCG7 672 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 JRKLQ9Y4A0 524 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 MTIF2P46199 727 aaKnown RBP15.5■□□□□ 0.07
NUP98-204ENST00000397004 KIF5AQ12840 1032 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 GRB10Q13322 594 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 LETM2Q2VYF4 491 aa15.5■□□□□ 0.07
NUP98-204ENST00000397004 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms