RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 M0R2N6 131 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 ADCY5O95622 1261 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 TEX13BQ9BXU2 312 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 BTBD18B2RXH4 712 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 IGF2BP3O00425 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 OPLAHO14841 1288 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 TAL1P17542 331 aaPredicted RBP16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 ADCY7P51828 1080 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 NOGQ13253 232 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 OXER1Q8TDS5 423 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 UBE2Q2Q8WVN8 375 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 CUL5Q93034 780 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 TNFRSF25Q93038 417 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 PARK7Q99497 189 aaKnown RBP16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 BTBD7Q9P203 1132 aa16.93■□□□□ 0.3
TM9SF1-202ENST00000396854 CNMDO75829 334 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 CYP2C8P10632 490 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 TM4SF4P48230 202 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 BRAPQ7Z569 592 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 IFNL1Q8IU54 200 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 RABGAP1Q9Y3P9 1069 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 NR5A1Q13285 461 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 RBPJLQ9UBG7 517 aa16.92■□□□□ 0.3
TM9SF1-202ENST00000396854 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 ALAS1P13196 640 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 STAT3P40763 770 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 GCLCP48506 637 aaPredicted RBP16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 GHRHRQ02643 423 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 GNL2Q13823 731 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 REXO1Q8N1G1 1221 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 SMCR8Q8TEV9 937 aaPredicted RBP16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 CLEC4DQ8WXI8 215 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 SPATC1LQ9H0A9 340 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 RIPK3Q9Y572 518 aa16.91■□□□□ 0.3
TM9SF1-202ENST00000396854 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 MEIS2O14770 477 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 ATL3Q6DD88 541 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 SAMD3Q8N6K7 520 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 MAF1Q9H063 256 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
TM9SF1-202ENST00000396854 LCTP09848 1927 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 COPB2P35606 906 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 PLS1Q14651 629 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MAP3K20Q9NYL2 800 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 NFIBO00712 420 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 ERVK-24P63145 666 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 GRM1Q13255 1194 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MYSM1Q5VVJ2 828 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 CHST13Q8NET6 341 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 NUP62CLQ9H1M0 184 aa16.89■□□□□ 0.29
TM9SF1-202ENST00000396854 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 SLC25A27O95847 323 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 HSD17B4P51659 736 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 AP3B2Q13367 1082 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 UBE2SQ16763 222 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 EARS2Q5JPH6 523 aaKnown RBP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 USP17L6PQ6QN14 398 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 KRT25Q7Z3Z0 450 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 MOV10L1Q9BXT6 1211 aaKnown RBP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-202ENST00000396854 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 PEX10O60683 326 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 AOC2O75106 756 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms