RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TPH2Q8IWU9 490 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 ZFYVE19Q96K21 471 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 POLE3Q9NRF9 147 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 ANXA1P04083 346 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 EHHADHQ08426 723 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 IFRD2Q12894 506 aaPredicted RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 PHKBQ93100 1093 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 TTC25Q96NG3 672 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 DIABLOQ9NR28 239 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 MRC2Q9UBG0 1479 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 KRT25Q7Z3Z0 450 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 GPBP1Q86WP2 473 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 TBK1Q9UHD2 729 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 MYH7P12883 1935 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 MCF2LO15068 1137 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 FAM180AQ6UWF9 173 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 RPS6KC1Q96S38 1066 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 PMLP29590 882 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 SMYD3Q9H7B4 428 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 PNMA2Q9UL42 364 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 CHMLP26374 656 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 FLCNQ8NFG4 579 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 MAPK13O15264 365 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
COL4A4-201ENST00000396625 LRWD1Q9UFC0 647 aa11.2□□□□□ -0.62
COL4A4-201ENST00000396625 A0A087WUV0 522 aaPredicted RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 EXOC1LA0A1B0GW35 172 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 HMGB3O15347 200 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 DNAJC6O75061 913 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 APOA1P02647 267 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 PLS3P13797 630 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 XPAP23025 273 aaPredicted RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 CAPRIN1Q14444 709 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 CDC37L1Q7L3B6 337 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 OR9Q1Q8NGQ5 310 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 DCTN3O75935 186 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 GAS7O60861 476 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 HINFPQ9BQA5 517 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 ANKRD2Q9GZV1 360 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 SYTL2Q9HCH5 934 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 OTUD6AQ7L8S5 288 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 SLC27A2O14975 620 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 CHEK2O96017 543 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 SERPINB2P05120 415 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 RFX6Q8HWS3 928 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 TTC1Q99614 292 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 K7ENM7 598 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 ACTN1P12814 892 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 HABP4Q5JVS0 413 aaKnown RBP11.19□□□□□ -0.62
COL4A4-201ENST00000396625 TRIM67Q6ZTA4 783 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 ATP8B2P98198 1209 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
COL4A4-201ENST00000396625 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 DAB1O75553 588 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 TNNC2P02585 160 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PLEKHM3Q6ZWE6 761 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 NIP7Q9Y221 180 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 KRT75O95678 551 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 CPA1P15085 419 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 SLC9A5Q14940 896 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 NAA35Q5VZE5 725 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 NFKBIL1Q9UBC1 381 aaPredicted RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PAIP2BQ9ULR5 123 aaKnown RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 CHGBP05060 677 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 ESRRAP11474 423 aaPredicted RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 NGLY1Q96IV0 654 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 LRRC37BQ96QE4 947 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms