RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 DDX11Q96FC9 970 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 GLT8D2Q9H1C3 349 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 XPNPEP3Q9NQH7 507 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 INCENPQ9NQS7 918 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 ZEB2O60315 1214 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 HAND2P61296 217 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 CCDC144CPQ8IYA2 1237 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
LMO3-205ENST00000396205 OPLAHO14841 1288 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 EVI5O60447 810 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 CD4P01730 458 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 TGFB3P10600 412 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 RNF207Q6ZRF8 634 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 CATIPQ7Z7H3 387 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 PPP4R2Q9NY27 417 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 A0A0U1RQG5 324 aaPredicted RBP7.67□□□□□ -1.18
LMO3-205ENST00000396205 REC8O95072 547 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 HABP4Q5JVS0 413 aaKnown RBP7.67□□□□□ -1.18
LMO3-205ENST00000396205 CCDC62Q6P9F0 684 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 FBXO11Q86XK2 927 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 DIS3LQ8TF46 1054 aaKnown RBP7.67□□□□□ -1.18
LMO3-205ENST00000396205 A0A1W2PQ45 241 aaPredicted RBP7.67□□□□□ -1.18
LMO3-205ENST00000396205 A0A1W2PQY0 241 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 ESYT2A0FGR8 921 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 A6NJR5 290 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 HOXC8P31273 242 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 ANAPC15P60006 121 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 LRRC26Q2I0M4 334 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 QRICH1Q2TAL8 776 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 TTBK2Q6IQ55 1244 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 SPC25Q9HBM1 224 aa7.67□□□□□ -1.18
LMO3-205ENST00000396205 H0YGN5 161 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 PGK2P07205 417 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 CPT1AP50416 773 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 ACLYP53396 1101 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 POTEDQ86YR6 584 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 NSUN6Q8TEA1 469 aaKnown RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 SCFD2Q8WU76 684 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 KLRF2D3W0D1 207 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 RFC2P35250 354 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 DHX32Q7L7V1 743 aaKnown RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 ZNF654Q8IZM8 581 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 NFIBO00712 420 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 PARNO95453 639 aaKnown RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 ALAS1P13196 640 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 RPS6P62753 249 aaKnown RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 FUT2Q10981 343 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 SLC35G1Q2M3R5 365 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 RRP12Q5JTH9 1297 aaKnown RBP7.66□□□□□ -1.18
LMO3-205ENST00000396205 RASIP1Q5U651 963 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 NFRKBQ6P4R8 1299 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 SLC30A10Q6XR72 485 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 TBX21Q9UL17 535 aa7.66□□□□□ -1.18
LMO3-205ENST00000396205 FRMPD2Q68DX3 1309 aaPredicted RBP7.65□□□□□ -1.18
LMO3-205ENST00000396205 IFIT3O14879 490 aaKnown RBP7.65□□□□□ -1.18
LMO3-205ENST00000396205 CYTH3O43739 400 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 PPP1R11O60927 126 aaPredicted RBP7.65□□□□□ -1.18
LMO3-205ENST00000396205 CAND2O75155 1236 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 EIF3JO75822 258 aaKnown RBP7.65□□□□□ -1.18
LMO3-205ENST00000396205 PFKMP08237 780 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 RTP1P59025 263 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 TNFAIP2Q03169 654 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 TMTC3Q6ZXV5 915 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 PDLIM7Q9NR12 457 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 PXMP2Q9NR77 195 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 MAFGO15525 162 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 ADCY6O43306 1168 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 PRC1O43663 620 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 BAATQ14032 418 aaPredicted RBP7.65□□□□□ -1.18
LMO3-205ENST00000396205 NIPA1Q7RTP0 329 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 RALGAPA2Q2PPJ7 1873 aa7.65□□□□□ -1.18
LMO3-205ENST00000396205 WDR81Q562E7 1941 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 SIP14410 1827 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 ARVCFO00192 962 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 RPLP2P05387 115 aaKnown RBP7.65□□□□□ -1.19
LMO3-205ENST00000396205 PSMA5P28066 241 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 CNTN2Q02246 1040 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 PCNX4Q63HM2 1172 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 TLK2Q86UE8 772 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 FAM126BQ8IXS8 530 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 CPXCR1Q8N123 301 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 SENP7Q9BQF6 1050 aa7.65□□□□□ -1.19
LMO3-205ENST00000396205 CNTNAP5Q8WYK1 1306 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 HAS3O00219 553 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 SMPD1P17405 629 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 TAL1P17542 331 aaPredicted RBP7.64□□□□□ -1.19
LMO3-205ENST00000396205 WDR78Q5VTH9 848 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 VSIG10LQ86VR7 867 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 GIMAP8Q8ND71 665 aaPredicted RBP7.64□□□□□ -1.19
LMO3-205ENST00000396205 PPTC7Q8NI37 304 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 CTCFLQ8NI51 663 aaPredicted RBP7.64□□□□□ -1.19
LMO3-205ENST00000396205 CCDC136Q96JN2 1154 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 INPP4AQ96PE3 977 aaPredicted RBP7.64□□□□□ -1.19
LMO3-205ENST00000396205 GPCPD1Q9NPB8 672 aa7.64□□□□□ -1.19
LMO3-205ENST00000396205 SH3GLB2Q9NR46 395 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms