RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 SNX12Q9UMY4 172 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 CEP170BQ9Y4F5 1589 aaPredicted RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 ZNF609O15014 1411 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 TULP4Q9NRJ4 1543 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 A0A087X0B3 334 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 RASSF10A6NK89 507 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 TMEM110-MUSTN1A8MSY1 372 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 CDKL5O76039 1030 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 CLSTN1O94985 981 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 FLT3P36888 993 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 PTPAQ15257 358 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 SLC5A9Q2M3M2 681 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 NUGGCQ68CJ6 796 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 APTXQ7Z2E3 356 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 LRRC34Q8IZ02 419 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 CCT6BQ92526 530 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 RBM41Q96IZ5 413 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 GORASP1Q9BQQ3 440 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 PREBQ9HCU5 417 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 INTUQ9ULD6 942 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 CORO1CQ9ULV4 474 aaPredicted RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 ATP8A1Q9Y2Q0 1164 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 TRAPPC3O43617 180 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 HIP1RO75146 1068 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 MYL1P05976 194 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 MMEP08473 750 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 SAFBQ15424 915 aaKnown RBP eCLIP8.11□□□□□ -1.11
BDNF-207ENST00000395986 ZNF174Q15697 407 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 IMMTQ16891 758 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 PAPD7Q5XG87 772 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 ANKRD42Q8N9B4 389 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 UCMAQ8WVF2 138 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 MMRN2Q9H8L6 949 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 BSDC1Q9NW68 430 aaPredicted RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 SLC5A4Q9NY91 659 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 BZW2Q9Y6E2 419 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 TMEM131LA2VDJ0 1609 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 FOXO6A8MYZ6 492 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 ZCCHC18P0CG32 403 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 FERP16591 822 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 ATP11AP98196 1134 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 ROR2Q01974 943 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 BYSLQ13895 437 aaKnown RBP8.11□□□□□ -1.11
BDNF-207ENST00000395986 LLGL1Q15334 1064 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 EPHA10Q5JZY3 1008 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 IQCKQ8N0W5 287 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.11□□□□□ -1.11
BDNF-207ENST00000395986 EBF2Q9HAK2 575 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
BDNF-207ENST00000395986 FBXL5Q9UKA1 691 aa8.11□□□□□ -1.11
BDNF-207ENST00000395986 MED23Q9ULK4 1368 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 B4E1Z4 1266 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 FAM163BP0C2L3 166 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 HSD17B3P37058 310 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 SERPINB4P48594 390 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 BLMHQ13867 455 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 C1orf141Q5JVX7 400 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 CCNJLQ8IV13 435 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 PRMT1Q99873 361 aaKnown RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 TAF1DQ9H5J8 278 aaPredicted RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 GALNT8Q9NY28 637 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 SUGT1Q9Y2Z0 365 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 STXBP3O00186 592 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 AHCYL1O43865 530 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 USO1O60763 962 aaKnown RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 YY1P25490 414 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 CA8P35219 290 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 PPP2R2AP63151 447 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 MUM1Q2TAK8 710 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 LMNTD2Q8IXW0 634 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 BICD1Q96G01 975 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 HOMER3Q9NSC5 361 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 NKX1-2Q9UD57 310 aaPredicted RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 MYH8P13535 1937 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 GOLGA8AA7E2F4 631 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 HMGB1P1B2RPK0 211 aaPredicted RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 CETN3O15182 167 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 RAD51CO43502 376 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 FESP07332 822 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 CHN1P15882 459 aa8.1□□□□□ -1.11
BDNF-207ENST00000395986 MTIF2P46199 727 aaKnown RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 PRPF4BQ13523 1007 aaKnown RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 ACBD5Q5T8D3 534 aaPredicted RBP8.1□□□□□ -1.11
BDNF-207ENST00000395986 ZNF449Q6P9G9 518 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms