RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 PCDHA1Q9Y5I3 950 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 COL18A1P39060 1754 aa16.08■□□□□ 0.16
SREBF1-205ENST00000395757 KIF20AO95235 890 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 GPS2Q13227 327 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 ANKRD40Q6AI12 368 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 ABHD10Q9NUJ1 306 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 CFBP00751 764 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 PNMA6AP0CW24 399 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-205ENST00000395757 ZNF18P17022 549 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 RAPGEF1Q13905 1077 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 RDH13Q8NBN7 331 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 DUSP10Q9Y6W6 482 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 EP400Q96L91 3159 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 MMP10P09238 476 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 NOP2P46087 812 aaKnown RBP16.07■□□□□ 0.16
SREBF1-205ENST00000395757 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
SREBF1-205ENST00000395757 KIF5AQ12840 1032 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.166e-7■■□□□ 12.2
SREBF1-205ENST00000395757 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
SREBF1-205ENST00000395757 CCDC84Q86UT8 332 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-205ENST00000395757 TSG101Q99816 390 aa16.07■□□□□ 0.16
SREBF1-205ENST00000395757 E9PMD0 336 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 ZSCAN20P17040 1043 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-205ENST00000395757 NPY5RQ15761 445 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
SREBF1-205ENST00000395757 RWDD2AQ9UIY3 292 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 PLEKP08567 350 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-205ENST00000395757 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-205ENST00000395757 ERVK-24P63145 666 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 DNAAF5Q86Y56 855 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 SMARCAL1Q9NZC9 954 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 DDX25Q9UHL0 483 aaKnown RBP16.06■□□□□ 0.16
SREBF1-205ENST00000395757 H7C1D1 291 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 SLC37A4O43826 429 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 SP4Q02446 784 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 TAF3Q5VWG9 929 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
SREBF1-205ENST00000395757 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 P2RX5Q93086 422 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 PYM1Q9BRP8 204 aaKnown RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 SORBS3O60504 671 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 ERLIN1O75477 346 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 ZFPM1Q8IX07 1006 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 EFCAB8A8MWE9 144 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 NDUFA10O95299 355 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 APBA1Q02410 837 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 SEPT2Q15019 361 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 BARGINQ6ZT62 677 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 MB21D1Q8N884 522 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 SH2D3AQ9BRG2 576 aa16.05■□□□□ 0.16
SREBF1-205ENST00000395757 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 TDRD3Q9H7E2 651 aaKnown RBP16.05■□□□□ 0.16
SREBF1-205ENST00000395757 PHLPP2Q6ZVD8 1323 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 ZNF185O15231 689 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 TADA3O75528 432 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 GYS1P13807 737 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 CHRNA5P30532 468 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 USP8P40818 1118 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 MIGA2Q7L4E1 593 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
SREBF1-205ENST00000395757 SAMM50Q9Y512 469 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 KRT86O43790 486 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
SREBF1-205ENST00000395757 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 FANCGO15287 622 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 TM4SF1P30408 202 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 CCDC70Q6NSX1 233 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 CNNM4Q6P4Q7 775 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
SREBF1-205ENST00000395757 ATRNO75882 1429 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 BICDL2A1A5D9 508 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 POTECB2RU33 542 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 VPS72Q15906 364 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-205ENST00000395757 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 DDX12PQ92771 950 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 SPAG5Q96R06 1193 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms