RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 CALML4Q96GE6 196 aa20.9■□□□□ 0.94
SIL1-202ENST00000394817 GTPBP4Q9BZE4 634 aaKnown RBP20.9■□□□□ 0.94
SIL1-202ENST00000394817 ZNF277Q9NRM2 450 aaPredicted RBP20.9■□□□□ 0.94
SIL1-202ENST00000394817 GYPCP04921 128 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 FECHP22830 423 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 CACNB3P54284 484 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 PDCL2Q8N4E4 241 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 CUL5Q93034 780 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 MKL1Q969V6 931 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 CCDC47Q96A33 483 aaKnown RBP20.89■□□□□ 0.93
SIL1-202ENST00000394817 PI4KBQ9UBF8 816 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 SERPINA10Q9UK55 444 aa20.89■□□□□ 0.93
SIL1-202ENST00000394817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.89■□□□□ 0.934e-6■■■□□ 14.7
SIL1-202ENST00000394817 TRIM49BA6NDI0 452 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 DDTLA6NHG4 134 aaPredicted RBP20.88■□□□□ 0.93
SIL1-202ENST00000394817 TDP2O95551 362 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 TXKP42681 527 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 RBM5P52756 815 aaKnown RBP eCLIP20.88■□□□□ 0.93
SIL1-202ENST00000394817 AMPD3Q01432 767 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 ATP2B2Q01814 1243 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 TRIM14Q14142 442 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
SIL1-202ENST00000394817 TMEM266Q2M3C6 531 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 KCTD1Q719H9 257 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 IRF2BP1Q8IU81 584 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 PSMD1Q99460 953 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 THAP9Q9H5L6 903 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 TAB2Q9NYJ8 693 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 NYAP2Q9P242 653 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
SIL1-202ENST00000394817 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 PMS1P54277 932 aaKnown RBP20.88■□□□□ 0.93
SIL1-202ENST00000394817 TCP10Q12799 353 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 DCAF4Q8WV16 495 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 DHTKD1Q96HY7 919 aaPredicted RBP20.88■□□□□ 0.93
SIL1-202ENST00000394817 RAB34Q9BZG1 259 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 VPS16Q9H269 839 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 STK17AQ9UEE5 414 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 DNAI1Q9UI46 699 aa20.88■□□□□ 0.93
SIL1-202ENST00000394817 USP17L10C9JJH3 530 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 TPM1P09493 284 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 EEF1GP26641 437 aaKnown RBP20.87■□□□□ 0.93
SIL1-202ENST00000394817 CASP14P31944 242 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 SLC16A2P36021 539 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 PPP1R2P41236 205 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 TNNI2P48788 182 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 PDIA5Q14554 519 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 NAA30Q147X3 362 aaPredicted RBP20.87■□□□□ 0.93
SIL1-202ENST00000394817 UBE2SQ16763 222 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 COBLL1Q53SF7 1204 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 TTI2Q6NXR4 508 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 SH3BP5LQ7L8J4 393 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 LRWD1Q9UFC0 647 aa20.87■□□□□ 0.93
SIL1-202ENST00000394817 COL2A1P02458 1487 aaPredicted RBP20.87■□□□□ 0.93
SIL1-202ENST00000394817 FXR1P51114 621 aaKnown RBP eCLIP20.86■□□□□ 0.93
SIL1-202ENST00000394817 MRPL12P52815 198 aaKnown RBP20.86■□□□□ 0.93
SIL1-202ENST00000394817 ASIC1P78348 528 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 GRB10Q13322 594 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 CERKLQ49MI3 558 aaPredicted RBP20.86■□□□□ 0.93
SIL1-202ENST00000394817 TATDN1Q6P1N9 297 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 NOC3LQ8WTT2 800 aaKnown RBP20.86■□□□□ 0.93
SIL1-202ENST00000394817 ATRNL1Q5VV63 1379 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 SOWAHDA6NJG2 315 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 FANCGO15287 622 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
SIL1-202ENST00000394817 POLD1P28340 1107 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 PDE4DQ08499 809 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 LARGE2Q8N3Y3 721 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 TRIM47Q96LD4 638 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 GLT8D2Q9H1C3 349 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 BLOC1S4Q9NUP1 217 aa20.86■□□□□ 0.93
SIL1-202ENST00000394817 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
SIL1-202ENST00000394817 RAD17O75943 681 aa20.85■□□□□ 0.93
SIL1-202ENST00000394817 CCDC175P0C221 793 aa20.85■□□□□ 0.93
SIL1-202ENST00000394817 GCFC2P16383 781 aaKnown RBP20.85■□□□□ 0.93
SIL1-202ENST00000394817 CPLX3Q8WVH0 158 aa20.85■□□□□ 0.93
SIL1-202ENST00000394817 CCDC94Q9BW85 323 aaPredicted RBP20.85■□□□□ 0.93
SIL1-202ENST00000394817 PIM2Q9P1W9 311 aa20.85■□□□□ 0.93
SIL1-202ENST00000394817 PPP1R1BQ9UD71 204 aaPredicted RBP20.85■□□□□ 0.93
SIL1-202ENST00000394817 BICDL2A1A5D9 508 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 LGALS16A8MUM7 142 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 CCNE1P24864 410 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 MTF1Q14872 753 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 RAD9BQ6WBX8 426 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 ZSCAN29Q8IWY8 852 aaPredicted RBP20.84■□□□□ 0.93
SIL1-202ENST00000394817 PNMA5Q96PV4 448 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 DESI2Q9BSY9 194 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 PSTPIP2Q9H939 334 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 SLC1A4P43007 532 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 TGFB2P61812 414 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 SHROOM1Q2M3G4 852 aaPredicted RBP20.84■□□□□ 0.93
SIL1-202ENST00000394817 CNNM4Q6P4Q7 775 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 TMEM179Q6ZVK1 233 aa20.84■□□□□ 0.93
SIL1-202ENST00000394817 SV2BQ7L1I2 683 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms