RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 TMTC1Q8IUR5 882 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 ZNF507Q8TCN5 953 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 DESI2Q9BSY9 194 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 STK17AQ9UEE5 414 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 SLC37A4O43826 429 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 CCNE1P24864 410 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 MRPL12P52815 198 aaKnown RBP17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 GNG11P61952 73 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 GRB10Q13322 594 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 DACT2Q5SW24 774 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 STYK1Q6J9G0 422 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 ZNF397Q8NF99 534 aaPredicted RBP17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 WDR24Q96S15 920 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 ABHD10Q9NUJ1 306 aa17.2■□□□□ 0.34
UBE2D3-207ENST00000394801 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 TDP2O95551 362 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 UBXN1Q04323 297 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 PDE4DQ08499 809 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 ELF2Q15723 593 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 CUL5Q93034 780 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 DUSP9Q99956 384 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 RAB34Q9BZG1 259 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 EXOC1Q9NV70 894 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 NYAP2Q9P242 653 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 V9GYY5 206 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-207ENST00000394801 BICDL2A1A5D9 508 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 RNF225M0QZC1 329 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 URI1O94763 535 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 KIF20AO95235 890 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 CASQ1P31415 396 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 STK4Q13043 487 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 P2RX5Q93086 422 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 KIFC2Q96AC6 838 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 TRIM47Q96LD4 638 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 PNMA5Q96PV4 448 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 SIPA1L1O43166 1804 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 ASIC1P78348 528 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 FAM198AQ9UFP1 575 aa17.18■□□□□ 0.34
UBE2D3-207ENST00000394801 PVALEFA0A1B0GWK0 134 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 LRRN4CLQ8ND94 238 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 GLT8D2Q9H1C3 349 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 KANSL2Q9H9L4 492 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 ZHX1Q9UKY1 873 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 SLC16A2P36021 539 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 CYP26C1Q6V0L0 522 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 KCTD1Q719H9 257 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-207ENST00000394801 DDTLA6NHG4 134 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 H0YIN7 160 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 SLURP2P0DP57 97 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 GCFC2P16383 781 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 KRT9P35527 623 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 DNM2P50570 870 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 ERVK-24P63145 666 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 ANKRD40Q6AI12 368 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 SH3BP5LQ7L8J4 393 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 LARP4BQ92615 738 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 MAGEC2Q9UBF1 373 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 ECE2O60344 883 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 FCER1AP12319 257 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 TNNI2P48788 182 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 UBE2SQ16763 222 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 CERKLQ49MI3 558 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 UNC13DQ70J99 1090 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 CREBRFQ8IUR6 639 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 KIAA0895Q8NCT3 520 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 NAP1L4Q99733 375 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
UBE2D3-207ENST00000394801 MYMKA6NI61 221 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms