RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 TMC6Q7Z403 805 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 MED15Q96RN5 788 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 AMNQ9BXJ7 453 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 CD2APQ9Y5K6 639 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 PRR16Q569H4 304 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 PDXDC2PQ6P474 469 aa22.97■■□□□ 1.27
PRKCD-202ENST00000394729 DDNO94850 711 aaPredicted RBP22.96■■□□□ 1.27
PRKCD-202ENST00000394729 DPYDQ12882 1025 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 ARL6IP4Q66PJ3 421 aaKnown RBP22.96■■□□□ 1.27
PRKCD-202ENST00000394729 DYMQ7RTS9 669 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 TRMT1LQ7Z2T5 733 aaKnown RBP22.96■■□□□ 1.27
PRKCD-202ENST00000394729 POLD4Q9HCU8 107 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 CTNND2Q9UQB3 1225 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 NPM3O75607 178 aaKnown RBP22.96■■□□□ 1.27
PRKCD-202ENST00000394729 CAVIN2O95810 425 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 ERCC3P19447 782 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 SMARCA1P28370 1054 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 FANCCQ00597 558 aa22.96■■□□□ 1.27
PRKCD-202ENST00000394729 MORC3Q14149 939 aa22.95■■□□□ 1.27
PRKCD-202ENST00000394729 MEIS2O14770 477 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 CACTINQ8WUQ7 758 aaKnown RBP22.95■■□□□ 1.26
PRKCD-202ENST00000394729 NAP1L5Q96NT1 182 aaPredicted RBP22.95■■□□□ 1.26
PRKCD-202ENST00000394729 ANO3Q9BYT9 981 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 TANGO6Q9C0B7 1094 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 CLCN1P35523 988 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 GOPCQ9HD26 462 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 GGA3Q9NZ52 723 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 PKD2L1Q9P0L9 805 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 TMX2Q9Y320 296 aa22.95■■□□□ 1.26
PRKCD-202ENST00000394729 GOLGA6L6A8MZA4 724 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 SARSP49591 514 aaKnown RBP22.94■■□□□ 1.26
PRKCD-202ENST00000394729 KANK3Q6NY19 840 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 GMCL1P1Q8NEA9 526 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 TEPSINQ96N21 525 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 UBASH3AP57075 661 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 TPM4P67936 248 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 CACNB1Q02641 598 aaPredicted RBP22.94■■□□□ 1.26
PRKCD-202ENST00000394729 MTMR2Q13614 643 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 AGBL1Q96MI9 1066 aa22.94■■□□□ 1.26
PRKCD-202ENST00000394729 SMTNL1A8MU46 457 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 CCDC34Q96HJ3 373 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 GMCL1Q96IK5 515 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 ESYT2A0FGR8 921 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 TRIM49BA6NDI0 452 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 SPDYE3A6NKU9 549 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 SPP2Q13103 211 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 SNX29Q8TEQ0 813 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
PRKCD-202ENST00000394729 H7C1D1 291 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 FAM83AQ86UY5 434 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 MTMR8Q96EF0 704 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 WRNIP1Q96S55 665 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 MMTAG2Q9BU76 263 aaKnown RBP22.92■■□□□ 1.26
PRKCD-202ENST00000394729 OPLAHO14841 1288 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 ASNSP08243 561 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 MCM6Q14566 821 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 TPD52L1Q16890 204 aaPredicted RBP22.92■■□□□ 1.26
PRKCD-202ENST00000394729 VCPKMTQ9H867 229 aa22.92■■□□□ 1.26
PRKCD-202ENST00000394729 RPN1P04843 607 aaKnown RBP22.91■■□□□ 1.26
PRKCD-202ENST00000394729 KCNK18Q7Z418 384 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 HAS1Q92839 578 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 FZD9O00144 591 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 IDEP14735 1019 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 ZNF76P36508 570 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 ECM1Q16610 540 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 PPP4R3BQ5MIZ7 849 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 SH3RF1Q7Z6J0 888 aa22.91■■□□□ 1.26
PRKCD-202ENST00000394729 ZBED3Q96IU2 234 aaPredicted RBP22.91■■□□□ 1.26
PRKCD-202ENST00000394729 CHMP2AO43633 222 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 CLK2P49760 499 aaKnown RBP22.9■■□□□ 1.26
PRKCD-202ENST00000394729 ASIC1P78348 528 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 PCDHA12Q9UN75 941 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 PHF20L1A8MW92 1017 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 MEIS1O00470 390 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 PES1O00541 588 aaKnown RBP22.9■■□□□ 1.26
PRKCD-202ENST00000394729 ARHGAP4P98171 946 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 HS1BP3Q53T59 392 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 SPON1Q9HCB6 807 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 PEX10O60683 326 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 CCT6AP40227 531 aaKnown RBP22.9■■□□□ 1.26
PRKCD-202ENST00000394729 CYP4A11Q02928 519 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 PGAP2Q9UHJ9 254 aa22.9■■□□□ 1.26
PRKCD-202ENST00000394729 MYH7BA7E2Y1 1941 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 FAM86B1E9PN63 330 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 FLOT1O75955 427 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 FAM86B2P0C5J1 330 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 FCER1AP12319 257 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 HIRAP54198 1017 aaPredicted RBP22.89■■□□□ 1.26
PRKCD-202ENST00000394729 TNFAIP1Q13829 316 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 MTMR9Q96QG7 549 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 RNF181Q9P0P0 153 aa22.89■■□□□ 1.26
PRKCD-202ENST00000394729 SYNRGQ9UMZ2 1314 aa22.89■■□□□ 1.25
PRKCD-202ENST00000394729 TMEM266Q2M3C6 531 aa22.89■■□□□ 1.25
PRKCD-202ENST00000394729 MLKLQ8NB16 471 aa22.89■■□□□ 1.25
PRKCD-202ENST00000394729 WNK4Q96J92 1243 aa22.89■■□□□ 1.25
PRKCD-202ENST00000394729 PURBQ96QR8 312 aaKnown RBP22.89■■□□□ 1.25
PRKCD-202ENST00000394729 TBC1D7Q9P0N9 293 aa22.89■■□□□ 1.25
PRKCD-202ENST00000394729 hCG_1984214I3L0E3 225 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 KMT5BQ4FZB7 885 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms