RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.08
USP49-203ENST00000394253 RFWD2Q8NHY2 731 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 BRIP1Q9BX63 1249 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 C1orf112Q9NSG2 853 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.08
USP49-203ENST00000394253 BLOC1S6Q9UL45 172 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 LETM2Q2VYF4 491 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 FMO2Q99518 471 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 MTRQ99707 1265 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 DNAJC6O75061 913 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 PLD3Q8IV08 490 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 CCDC88CQ9P219 2028 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 TOMM70O94826 608 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 MYLK4Q86YV6 388 aaPredicted RBP14.52□□□□□ -0.09
USP49-203ENST00000394253 MYCT1Q8N699 235 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 NDEL1Q9GZM8 345 aa14.52□□□□□ -0.09
USP49-203ENST00000394253 NR1I2O75469 434 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 TCF3P15923 654 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 AK2P54819 239 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 WAPLQ7Z5K2 1190 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 NSD2O96028 1365 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 MEIS1O00470 390 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 KIF23Q02241 960 aaPredicted RBP14.51□□□□□ -0.09
USP49-203ENST00000394253 CBX8Q9HC52 389 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 PMLP29590 882 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 ADCY2Q08462 1091 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 LRMPQ12912 555 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 PCGF5Q86SE9 256 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 PARD3BQ8TEW8 1205 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 NUDCD1Q96RS6 583 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 HAUS4Q9H6D7 363 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 SYBUQ9NX95 663 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 ZNF148Q9UQR1 794 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 DDX5P17844 614 aaKnown RBP14.51□□□□□ -0.09
USP49-203ENST00000394253 CUL1Q13616 776 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 ST7Q9NRC1 585 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 CCDC90BQ9GZT6 254 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 KRT19P08727 400 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 C10orf76Q5T2E6 689 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 KAZNQ674X7 775 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 HIBCHQ6NVY1 386 aaPredicted RBP14.51□□□□□ -0.09
USP49-203ENST00000394253 TAGAPQ8N103 731 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 YIPF3Q9GZM5 350 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 SLC12A5Q9H2X9 1139 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 IQANK1A0A1B0GTG1 560 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 NR1D1P20393 614 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 NFKBIAP25963 317 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 C1orf146Q5VVC0 180 aa14.51□□□□□ -0.09
USP49-203ENST00000394253 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.51□□□□□ -0.09
USP49-203ENST00000394253 EIF2AK4Q9P2K8 1649 aaKnown RBP14.51□□□□□ -0.09
USP49-203ENST00000394253 YARSP54577 528 aaKnown RBP14.5□□□□□ -0.09
USP49-203ENST00000394253 NR1H3Q13133 447 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 MCUQ8NE86 351 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 RAPGEF5Q92565 580 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 THAP11Q96EK4 314 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 FAM207AQ9NSI2 230 aaPredicted RBP14.5□□□□□ -0.09
USP49-203ENST00000394253 DONSONQ9NYP3 566 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 EXOC1LA0A1B0GW35 172 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 ZNF500O60304 480 aaPredicted RBP14.5□□□□□ -0.09
USP49-203ENST00000394253 ABCB4P21439 1286 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 SLC44A4Q53GD3 710 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 CFAP36Q96G28 342 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 SIKE1Q9BRV8 207 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 CCDC151A5D8V7 595 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 H0YCG3 227 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 TOM1L1O75674 476 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 IGBP1P78318 339 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 NLRP4Q96MN2 994 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 PLIN2Q99541 437 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 MTRF1O75570 445 aaKnown RBP14.5□□□□□ -0.09
USP49-203ENST00000394253 TFAP4Q01664 338 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 SLC30A9Q6PML9 568 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 TRIM63Q969Q1 353 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 IL16Q14005 1332 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 CREB3L3Q68CJ9 461 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
USP49-203ENST00000394253 DTNBO60941 627 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 PDE1AP54750 535 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 RUNX1T1Q06455 604 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 CUL3Q13618 768 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 SLC9C2Q5TAH2 1124 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 UBN1Q9NPG3 1134 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 MYH15Q9Y2K3 1946 aa14.5□□□□□ -0.09
USP49-203ENST00000394253 VCAM1P19320 739 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 TAC1P20366 129 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 HERC4Q5GLZ8 1057 aaPredicted RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 PPP4R4Q6NUP7 873 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 RNF14Q9UBS8 474 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 KCNJ18B7U540 433 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 STXBP3O00186 592 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 AARSP49588 968 aaKnown RBP eCLIP14.49□□□□□ -0.09
USP49-203ENST00000394253 KCNJ12Q14500 433 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 ACAD11Q709F0 780 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 ZFYVE19Q96K21 471 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 FAM81BQ96LP2 452 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms