RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SELENOOQ9BVL4 669 aa23.41■■□□□ 1.34
COL23A1-201ENST00000390654 ACBD3Q9H3P7 528 aa23.41■■□□□ 1.34
COL23A1-201ENST00000390654 DEF6Q9H4E7 631 aa23.41■■□□□ 1.34
COL23A1-201ENST00000390654 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 A0A1W2PQC6 194 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 RRP36Q96EU6 259 aaKnown RBP23.4■■□□□ 1.34
COL23A1-201ENST00000390654 UBA5Q9GZZ9 404 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 EHD4Q9H223 541 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 LRRC41Q15345 812 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 ZNF444Q8N0Y2 327 aaPredicted RBP23.4■■□□□ 1.34
COL23A1-201ENST00000390654 AFAP1L1Q8TED9 768 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 SECISBP2LQ93073 1101 aaKnown RBP23.4■■□□□ 1.34
COL23A1-201ENST00000390654 TMEM260Q9NX78 707 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 ARAP2Q8WZ64 1704 aa23.4■■□□□ 1.34
COL23A1-201ENST00000390654 PAPD7Q5XG87 772 aaKnown RBP23.39■■□□□ 1.34
COL23A1-201ENST00000390654 NFRKBQ6P4R8 1299 aa23.39■■□□□ 1.34
COL23A1-201ENST00000390654 SMARCC1Q92922 1105 aaPredicted RBP23.39■■□□□ 1.34
COL23A1-201ENST00000390654 GJA10Q969M2 543 aa23.39■■□□□ 1.34
COL23A1-201ENST00000390654 KANSL2Q9H9L4 492 aa23.39■■□□□ 1.34
COL23A1-201ENST00000390654 DMGDHQ9UI17 866 aaKnown RBP23.39■■□□□ 1.34
COL23A1-201ENST00000390654 PLCH1Q4KWH8 1693 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 KLRF2D3W0D1 207 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 STXBP3O00186 592 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 NAP1L1P55209 391 aaKnown RBP23.39■■□□□ 1.33
COL23A1-201ENST00000390654 SPA17Q15506 151 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 MIIPQ5JXC2 388 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 TMC4Q7Z404 712 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 GLIS3Q8NEA6 775 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 TMEM47Q9BQJ4 181 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 LRRC1Q9BTT6 524 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 TTYH3Q9C0H2 523 aa23.39■■□□□ 1.33
COL23A1-201ENST00000390654 CCNE1P24864 410 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 ZBED6P86452 979 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 SND1Q7KZF4 910 aaKnown RBP eCLIP23.38■■□□□ 1.33
COL23A1-201ENST00000390654 IFIH1Q9BYX4 1025 aaKnown RBP23.38■■□□□ 1.33
COL23A1-201ENST00000390654 SMCO2A6NFE2 343 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 BUB1O43683 1085 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 PCP11498 1178 aaKnown RBP23.38■■□□□ 1.33
COL23A1-201ENST00000390654 KCNB1Q14721 858 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 NFIXQ14938 502 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 KIAA0895Q8NCT3 520 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 SEMA6BQ9H3T3 888 aa23.38■■□□□ 1.33
COL23A1-201ENST00000390654 M0R2N6 131 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 SF3B3Q15393 1217 aaKnown RBP23.37■■□□□ 1.33
COL23A1-201ENST00000390654 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 TANGO6Q9C0B7 1094 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 AKR1B10O60218 316 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 OR52Z1P0C646 297 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 RNASE9P60153 205 aaKnown RBP23.37■■□□□ 1.33
COL23A1-201ENST00000390654 MEA1Q16626 185 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 C12orf60Q5U649 245 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 RRAGAQ7L523 313 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 MED4Q9NPJ6 270 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 ARHGAP20Q9P2F6 1191 aa23.37■■□□□ 1.33
COL23A1-201ENST00000390654 EIF4A3P38919 411 aaKnown RBP23.36■■□□□ 1.33
COL23A1-201ENST00000390654 TUBB4BP68371 445 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 EP400Q96L91 3159 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 FLT1P17948 1338 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
COL23A1-201ENST00000390654 MAP9Q49MG5 647 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 C8orf37Q96NL8 207 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 CCSER1Q9C0I3 900 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 SRCAPQ6ZRS2 3230 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 GRM4Q14833 912 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 CCNI2Q6ZMN8 369 aaPredicted RBP23.36■■□□□ 1.33
COL23A1-201ENST00000390654 TBCKQ8TEA7 893 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 DHTKD1Q96HY7 919 aaPredicted RBP23.36■■□□□ 1.33
COL23A1-201ENST00000390654 NLRC4Q9NPP4 1024 aa23.36■■□□□ 1.33
COL23A1-201ENST00000390654 EIF3CLB5ME19 914 aaKnown RBP23.35■■□□□ 1.33
COL23A1-201ENST00000390654 CKAP4Q07065 602 aaKnown RBP23.35■■□□□ 1.33
COL23A1-201ENST00000390654 EIF3CQ99613 913 aaKnown RBP23.35■■□□□ 1.33
COL23A1-201ENST00000390654 AGPSO00116 658 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 IVLP07476 585 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 APBA1Q02410 837 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 DGKHQ86XP1 1220 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 PLCD3Q8N3E9 789 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 CCDC47Q96A33 483 aaKnown RBP23.35■■□□□ 1.33
COL23A1-201ENST00000390654 MYH10P35580 1976 aa23.35■■□□□ 1.33
COL23A1-201ENST00000390654 POTEMA6NI47 508 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 PRPF6O94906 941 aaKnown RBP23.34■■□□□ 1.33
COL23A1-201ENST00000390654 LDHBP07195 334 aaKnown RBP23.34■■□□□ 1.33
COL23A1-201ENST00000390654 VAV2P52735 878 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 ARID5AQ03989 594 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 MS4A14Q96JA4 679 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 TBC1D7Q9P0N9 293 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 SALL4Q9UJQ4 1053 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 PCDHA13Q9Y5I0 950 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 FRMPD2Q68DX3 1309 aaPredicted RBP23.34■■□□□ 1.33
COL23A1-201ENST00000390654 PIGSQ96S52 555 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 NHSL1Q5SYE7 1610 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 FAM170AA1A519 330 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 GOLGA6BA6NDN3 693 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 KIF11P52732 1056 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 GFPT1Q06210 699 aaPredicted RBP23.34■■□□□ 1.33
COL23A1-201ENST00000390654 CREG2Q8IUH2 290 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 EHBP1Q8NDI1 1231 aa23.34■■□□□ 1.33
COL23A1-201ENST00000390654 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.33
COL23A1-201ENST00000390654 LRRC53A6NM62 1247 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms