RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 RILPL2Q969X0 211 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 BAZ2BQ9UIF8 2168 aaKnown RBP13□□□□□ -0.33
TRAV3-201ENST00000390425 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
TRAV3-201ENST00000390425 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 GRXCR1A8MXD5 290 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 ACRP10323 421 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
TRAV3-201ENST00000390425 PSMC6P62333 389 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 PPIGQ13427 754 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAV3-201ENST00000390425 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 IQSEC1Q6DN90 963 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
TRAV3-201ENST00000390425 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
TRAV3-201ENST00000390425 Q9Y3F1 56 aa12.99□□□□□ -0.33
TRAV3-201ENST00000390425 NCOR1O75376 2440 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 B4GALT4O60513 344 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 CABYRO75952 493 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 EDNRBP24530 442 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 PBX2P40425 430 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 NUCB1Q02818 461 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 AAMPQ13685 434 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 DUSP28Q4G0W2 176 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 ZNF365Q70YC5 407 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 EXOC6Q8TAG9 804 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 TTC14Q96N46 770 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 NOC4LQ9BVI4 516 aaKnown RBP12.98□□□□□ -0.33
TRAV3-201ENST00000390425 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 WNT8AQ9H1J5 351 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
TRAV3-201ENST00000390425 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 FOSL2P15408 326 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 CALML3P27482 149 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
TRAV3-201ENST00000390425 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
TRAV3-201ENST00000390425 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 TMEM199Q8N511 208 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
TRAV3-201ENST00000390425 PBX4Q9BYU1 374 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 IL25Q9H293 177 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
TRAV3-201ENST00000390425 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
TRAV3-201ENST00000390425 CXXC1Q9P0U4 656 aaPredicted RBP12.97□□□□□ -0.33
TRAV3-201ENST00000390425 B4E1Z4 1266 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 KDM4AO75164 1064 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
TRAV3-201ENST00000390425 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
TRAV3-201ENST00000390425 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 ESR2Q92731 530 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 TIFAQ96CG3 184 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
TRAV3-201ENST00000390425 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
TRAV3-201ENST00000390425 REV3LO60673 3130 aa12.96□□□□□ -0.34
TRAV3-201ENST00000390425 ZNF213O14771 459 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ZEB2O60315 1214 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ARIH2O95376 493 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
TRAV3-201ENST00000390425 CCL23P55773 120 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 USH1GQ495M9 461 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
TRAV3-201ENST00000390425 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ENAHQ8N8S7 591 aaPredicted RBP12.95□□□□□ -0.34
TRAV3-201ENST00000390425 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 PPP1R13LQ8WUF5 828 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 HERVK_113Q902F9 699 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 COPS5Q92905 334 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
TRAV3-201ENST00000390425 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 DIAPH3Q9NSV4 1193 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 TRMT13Q9NUP7 481 aaKnown RBP12.95□□□□□ -0.34
TRAV3-201ENST00000390425 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
TRAV3-201ENST00000390425 TRANK1O15050 2925 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 PDE4DQ08499 809 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
TRAV3-201ENST00000390425 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 SCLYQ96I15 445 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
TRAV3-201ENST00000390425 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms