RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 POLD1P28340 1107 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 AMNQ9BXJ7 453 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 ARHGEF10LQ9HCE6 1279 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 LRWD1Q9UFC0 647 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 DDX25Q9UHL0 483 aaKnown RBP20.48■□□□□ 0.87
ACTN4-202ENST00000390009 ECE1P42892 770 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 SNAP25P60880 206 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 KCNB1Q14721 858 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 CDAN1Q8IWY9 1227 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 CALML4Q96GE6 196 aa20.48■□□□□ 0.87
ACTN4-202ENST00000390009 KLRC4O43908 158 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 GCFC2P16383 781 aaKnown RBP20.47■□□□□ 0.87
ACTN4-202ENST00000390009 PTPN21Q16825 1174 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 CDKAL1Q5VV42 579 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 FAM83AQ86UY5 434 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 SPICE1Q8N0Z3 855 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 ZBED3Q96IU2 234 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-202ENST00000390009 RAB34Q9BZG1 259 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 GDAQ9Y2T3 454 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 PAK1Q13153 545 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 PDIA5Q14554 519 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 KMT5BQ4FZB7 885 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 FBXO11Q86XK2 927 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 JDP2Q8WYK2 163 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 MTFR1LQ9H019 292 aa20.47■□□□□ 0.87
ACTN4-202ENST00000390009 WNT10BO00744 389 aa20.46■□□□□ 0.87
ACTN4-202ENST00000390009 TBC1D12O60347 775 aa20.46■□□□□ 0.87
ACTN4-202ENST00000390009 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
ACTN4-202ENST00000390009 ACER1Q8TDN7 264 aa20.46■□□□□ 0.87
ACTN4-202ENST00000390009 TMX2Q9Y320 296 aa20.46■□□□□ 0.87
ACTN4-202ENST00000390009 A0A1B0GTH6 734 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 POTEMA6NI47 508 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 MEIS2O14770 477 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 RHOBTB3O94955 611 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 PRCPP42785 496 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 SEMA3FQ13275 785 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 TPD52L1Q16890 204 aaPredicted RBP20.45■□□□□ 0.86
ACTN4-202ENST00000390009 NBPF9Q3BBW0 867 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 USH1GQ495M9 461 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 APTXQ7Z2E3 356 aaKnown RBP20.45■□□□□ 0.86
ACTN4-202ENST00000390009 NELFBQ8WX92 580 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 NAP1L4Q99733 375 aaKnown RBP20.45■□□□□ 0.86
ACTN4-202ENST00000390009 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 SMCHD1A6NHR9 2005 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 RRP9O43818 475 aaKnown RBP20.45■□□□□ 0.86
ACTN4-202ENST00000390009 GRB10Q13322 594 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 NR1I3Q14994 352 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 HAS1Q92839 578 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 TRIM9Q9C026 710 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 MYOZ2Q9NPC6 264 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 PPP1R1BQ9UD71 204 aaPredicted RBP20.45■□□□□ 0.86
ACTN4-202ENST00000390009 MAPK8IP1Q9UQF2 711 aa20.45■□□□□ 0.86
ACTN4-202ENST00000390009 COBLO75128 1261 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 STAT2P52630 851 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 KIAA1755Q5JYT7 1200 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 GOPCQ9HD26 462 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 SHTN1A0MZ66 631 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 NFKBIEO00221 500 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 NRDCO43847 1150 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 USP11P51784 963 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 AMPD3Q01432 767 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 HSP90AA2PQ14568 343 aaPredicted RBP20.44■□□□□ 0.86
ACTN4-202ENST00000390009 SPECC1LQ69YQ0 1117 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 ADSSL1Q8N142 457 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 C16orf45Q96MC5 204 aaPredicted RBP20.44■□□□□ 0.86
ACTN4-202ENST00000390009 C7orf25Q9BPX7 421 aa20.44■□□□□ 0.86
ACTN4-202ENST00000390009 ATAD5Q96QE3 1844 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 USP27XA6NNY8 438 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 TPM2P07951 284 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 TBX2Q13207 712 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-202ENST00000390009 GIMAP8Q8ND71 665 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-202ENST00000390009 CDK5RAP3Q96JB5 506 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 PNMA5Q96PV4 448 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 STK17AQ9UEE5 414 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 PGAP2Q9UHJ9 254 aa20.43■□□□□ 0.86
ACTN4-202ENST00000390009 MARCH6O60337 910 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 CAP2P40123 477 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 KRT79Q5XKE5 535 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 SNX29Q8TEQ0 813 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 PRIMPOLQ96LW4 560 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 BLOC1S4Q9NUP1 217 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
ACTN4-202ENST00000390009 ASIC1P78348 528 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 TNIP1Q15025 636 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 FAM83BQ5T0W9 1011 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 GJA10Q969M2 543 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 CCDC47Q96A33 483 aaKnown RBP20.42■□□□□ 0.86
ACTN4-202ENST00000390009 P2RX7Q99572 595 aaKnown RBP20.42■□□□□ 0.86
ACTN4-202ENST00000390009 KCND1Q9NSA2 647 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms