RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
IFT88-203ENST00000389373 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 EP400NLQ6ZTU2 488 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 CHURC1Q8WUH1 139 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 SNX27Q96L92 541 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
IFT88-203ENST00000389373 WDR11Q9BZH6 1224 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 LMCD1Q9NZU5 365 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 CHD7Q9P2D1 2997 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 REV3LO60673 3130 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.49□□□□□ -0.57
IFT88-203ENST00000389373 TTLL1O95922 423 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 RLBP1P12271 317 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 STAT2P52630 851 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 UBE3CQ15386 1083 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 DUSP28Q4G0W2 176 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 ZSCAN25Q6NSZ9 544 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 FAM160B2Q86V87 743 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 MKL1Q969V6 931 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
IFT88-203ENST00000389373 SUGCTQ9HAC7 445 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 CYP39A1Q9NYL5 469 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 ZBED9Q6R2W3 1325 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 XIRP2A4UGR9 3374 aa11.49□□□□□ -0.57
IFT88-203ENST00000389373 SCN5AQ14524 2016 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 IGKV6D-41A0A0C4DH26 115 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 BAIAP3O94812 1187 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 APPP05067 770 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 ATP5JP18859 108 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 MCCP23508 829 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 SLC1A4P43007 532 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 WDR5P61964 334 aaKnown RBP11.48□□□□□ -0.57
IFT88-203ENST00000389373 DEFB103AP81534 67 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
IFT88-203ENST00000389373 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 RPAP2Q8IXW5 612 aaPredicted RBP11.48□□□□□ -0.57
IFT88-203ENST00000389373 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 HAUS7Q99871 368 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 NCOR1O75376 2440 aa11.48□□□□□ -0.57
IFT88-203ENST00000389373 BDP1A6H8Y1 2624 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 H3BQ06 376 aaPredicted RBP11.47□□□□□ -0.57
IFT88-203ENST00000389373 RBAK-RBAKDNI3L0D1 243 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 PITPNM1O00562 1244 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 DCXO43602 365 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 TSPY3P0CV98 308 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 TSPY8P0CW00 308 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 TDO2P48775 406 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 ERVK-21P61565 698 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 BAATQ14032 418 aaPredicted RBP11.47□□□□□ -0.57
IFT88-203ENST00000389373 PTGISQ16647 500 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 COPS5Q92905 334 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 STRBPQ96SI9 672 aaKnown RBP11.47□□□□□ -0.57
IFT88-203ENST00000389373 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
IFT88-203ENST00000389373 RAD50Q92878 1312 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 PTPDC1A2A3K4 754 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 LINC01553A4QN01 128 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 ALDH5A1P51649 535 aaPredicted RBP11.46□□□□□ -0.57
IFT88-203ENST00000389373 TFAP4Q01664 338 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 NFRKBQ6P4R8 1299 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 RAD9AQ99638 391 aa11.46□□□□□ -0.57
IFT88-203ENST00000389373 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
IFT88-203ENST00000389373 KPNA6O60684 536 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 CALML3P27482 149 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
IFT88-203ENST00000389373 PDE4DQ08499 809 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 PPP2R5BQ15173 497 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
IFT88-203ENST00000389373 CNKSR3Q6P9H4 555 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 MORC4Q8TE76 937 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 C17orf80Q9BSJ5 609 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 PRR12Q9ULL5 1215 aa11.45□□□□□ -0.58
IFT88-203ENST00000389373 COL4A4P53420 1690 aaPredicted RBP11.44□□□□□ -0.58
IFT88-203ENST00000389373 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 GJB5O95377 273 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 SELPP16109 830 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 TCTN1Q2MV58 587 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
IFT88-203ENST00000389373 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 GDF6Q6KF10 455 aaPredicted RBP11.44□□□□□ -0.58
IFT88-203ENST00000389373 GIMAP6Q6P9H5 292 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 HFE2Q6ZVN8 426 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 LRRC8DQ7L1W4 858 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 NEDD1Q8NHV4 660 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 CAGE1Q8TC20 777 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms