RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 A0A0U1RQJ8 604 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ASIC1P78348 528 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 CALCRLQ16602 461 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ZNF569Q5MCW4 686 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ATRIPQ8WXE1 791 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 NUP58Q9BVL2 599 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
SCFD2-201ENST00000388940 LUC7L2Q9Y383 392 aaKnown RBP16.74■□□□□ 0.27
SCFD2-201ENST00000388940 PNMA6FA0A0J9YX94 578 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 EDIL3O43854 480 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ARHGAP25P42331 645 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 STK4Q13043 487 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 PICALMQ13492 652 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 DPP8Q6V1X1 898 aaPredicted RBP16.74■□□□□ 0.27
SCFD2-201ENST00000388940 SV2BQ7L1I2 683 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 TUBGCP2Q9BSJ2 902 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
SCFD2-201ENST00000388940 EPN1Q9Y6I3 576 aaPredicted RBP16.74■□□□□ 0.27
SCFD2-201ENST00000388940 GRB10Q13322 594 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 ANKRD40Q6AI12 368 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 COA7Q96BR5 231 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 ZC3H12CQ9C0D7 883 aaKnown RBP16.73■□□□□ 0.27
SCFD2-201ENST00000388940 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
SCFD2-201ENST00000388940 MYH4Q9Y623 1939 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 CTAGE9A4FU28 777 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 NDUFA10O95299 355 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 TXKP42681 527 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
SCFD2-201ENST00000388940 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
SCFD2-201ENST00000388940 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 BLOC1S4Q9NUP1 217 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 USP40Q9NVE5 1235 aa16.73■□□□□ 0.27
SCFD2-201ENST00000388940 RIMBP2O15034 1052 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
SCFD2-201ENST00000388940 SHMT1P34896 483 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
SCFD2-201ENST00000388940 MEA1Q16626 185 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 GPATCH4Q5T3I0 446 aaKnown RBP16.72■□□□□ 0.27
SCFD2-201ENST00000388940 IQCDQ96DY2 449 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 PNMA5Q96PV4 448 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 CHP1Q99653 195 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 JMJD4Q9H9V9 463 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
SCFD2-201ENST00000388940 FIGNQ5HY92 759 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 UNC13DQ70J99 1090 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 ADGRF4Q8IZF3 695 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 SLC35F6Q8N357 371 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
SCFD2-201ENST00000388940 MTMR8Q96EF0 704 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
SCFD2-201ENST00000388940 B4DLN1 442 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 SLC37A4O43826 429 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 FCER1AP12319 257 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 NPR1P16066 1061 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 FAM193AP78312 1265 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 WDR59Q6PJI9 974 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
SCFD2-201ENST00000388940 ERGIC2Q96RQ1 377 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 NAPGQ99747 312 aaPredicted RBP16.71■□□□□ 0.27
SCFD2-201ENST00000388940 EHD4Q9H223 541 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
SCFD2-201ENST00000388940 REXO2Q9Y3B8 237 aaKnown RBP16.71■□□□□ 0.27
SCFD2-201ENST00000388940 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
SCFD2-201ENST00000388940 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 MYH7BA7E2Y1 1941 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 A0A1W2PQJ5 194 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 MYMKA6NI61 221 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 RASSF10A6NK89 507 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 TDP2O95551 362 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
SCFD2-201ENST00000388940 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 PARD6BQ9BYG5 372 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms