RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 RNF34Q969K3 372 aa4.56□□□□□ -1.68
RNU6-1040P-201ENST00000383974 BCAS3Q9H6U6 928 aa4.56□□□□□ -1.68
RNU6-1040P-201ENST00000383974 METTL5Q9NRN9 209 aaKnown RBP4.56□□□□□ -1.68
RNU6-1040P-201ENST00000383974 WHRNQ9P202 907 aa4.56□□□□□ -1.68
RNU6-1040P-201ENST00000383974 SH3D21A4FU49 640 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 AURKAO14965 403 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 NCAM1P13591 858 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 PMLP29590 882 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 PLP2Q04941 152 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 DLX2Q07687 328 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 TCEAL1Q15170 157 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 NT5DC1Q5TFE4 455 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 CABP7Q86V35 215 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 KLHL25Q9H0H3 589 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 USP40Q9NVE5 1235 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 DDX41Q9UJV9 622 aaKnown RBP4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 DIS3Q9Y2L1 958 aaKnown RBP4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 RWDD3Q9Y3V2 267 aa4.55□□□□□ -1.68
RNU6-1040P-201ENST00000383974 EPHX1P07099 455 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 DPY19L1Q2PZI1 675 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 GNPTABQ3T906 1256 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 SPATS1Q496A3 300 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 ZFYVE27Q5T4F4 411 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 HEATR6Q6AI08 1181 aaKnown RBP4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 B3GNT8Q7Z7M8 397 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 TSPAN17Q96FV3 270 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 GINM1Q9NU53 330 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 PCDHB10Q9UN67 800 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 BACE2Q9Y5Z0 518 aa4.54□□□□□ -1.68
RNU6-1040P-201ENST00000383974 VAMP4O75379 141 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 SEPHS1P49903 392 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 PAK2Q13177 524 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 UBXN11Q5T124 520 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 CPNE8Q86YQ8 564 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 CARFQ8N187 725 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 LZTR1Q8N653 840 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 NETO2Q8NC67 525 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 SMARCC2Q8TAQ2 1214 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 BORCS6Q96GS4 357 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 FGD4Q96M96 766 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 GULP1Q9UBP9 304 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 CGGBP1Q9UFW8 167 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 SLC12A7Q9Y666 1083 aa4.53□□□□□ -1.68
RNU6-1040P-201ENST00000383974 C2orf71A6NGG8 1288 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 PPP1R11O60927 126 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SOX9P48436 509 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SLC7A5Q01650 507 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 TRIM26Q12899 539 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 COL9A2Q14055 689 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ADAT2Q7Z6V5 191 aaKnown RBP4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 C19orf47Q8N9M1 422 aaKnown RBP4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 KLHL6Q8WZ60 621 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 PEX11GQ96HA9 241 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NOX5Q96PH1 765 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 CRBNQ96SW2 442 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 MTA3Q9BTC8 594 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NUDT5Q9UKK9 219 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 EFR3BQ9Y2G0 817 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 DUSP10Q9Y6W6 482 aa4.52□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NPHP3-ACAD11A0A0J9YXS1 232 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 A0A1W2PQH9 124 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 K7ESM1 405 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NOBOXO60393 691 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 PPM1BO75688 479 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 RECKO95980 971 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 PAMP19021 973 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 GIPRP48546 466 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 EIF6P56537 245 aaKnown RBP4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 AMPD2Q01433 879 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 GRB10Q13322 594 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 WWC2Q6AWC2 1192 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 HHIPL2Q6UWX4 724 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 CPA5Q8WXQ8 436 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NTMQ9P121 344 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SIT1Q9Y3P8 196 aa4.51□□□□□ -1.69
RNU6-1040P-201ENST00000383974 CNR2P34972 360 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 GJA9P57773 515 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 CACNB2Q08289 660 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SLC9A5Q14940 896 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ZXDCQ2QGD7 858 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ZNF654Q8IZM8 581 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ARHGEF39Q8N4T4 335 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 USP33Q8TEY7 942 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 DDX1Q92499 740 aaKnown RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ZBTB8AQ96BR9 441 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 RCC1LQ96I51 464 aaKnown RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SPATA6Q9NWH7 488 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 APEX2Q9UBZ4 518 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 CNOT11Q9UKZ1 510 aaKnown RBP4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SUGT1Q9Y2Z0 365 aa4.5□□□□□ -1.69
RNU6-1040P-201ENST00000383974 C7orf72A4D263 438 aa4.49□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SCAMP3O14828 347 aaKnown RBP4.49□□□□□ -1.69
RNU6-1040P-201ENST00000383974 ZBTB7AO95365 584 aa4.49□□□□□ -1.69
RNU6-1040P-201ENST00000383974 NTRK1P04629 796 aa4.49□□□□□ -1.69
RNU6-1040P-201ENST00000383974 SMAD4Q13485 552 aaKnown RBP4.49□□□□□ -1.69
RNU6-1040P-201ENST00000383974 TMCO4Q5TGY1 634 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms