RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 AXIN2Q9Y2T1 843 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 LRP6O75581 1613 aa16.6■□□□□ 0.25
CTNS-202ENST00000381870 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 KIF11P52732 1056 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 NAPBQ9H115 298 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
CTNS-202ENST00000381870 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 BUB1O43683 1085 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 ATP6V1G2O95670 118 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 PDE6AP16499 860 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
CTNS-202ENST00000381870 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 AKNAD1Q5T1N1 836 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
CTNS-202ENST00000381870 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 C1orf131Q8NDD1 294 aaKnown RBP16.59■□□□□ 0.25
CTNS-202ENST00000381870 KRT12Q99456 494 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
CTNS-202ENST00000381870 EME2A4GXA9 379 aaPredicted RBP16.58■□□□□ 0.25
CTNS-202ENST00000381870 CALRP27797 417 aaKnown RBP16.58■□□□□ 0.25
CTNS-202ENST00000381870 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.25
CTNS-202ENST00000381870 ELF3P78545 371 aaPredicted RBP16.58■□□□□ 0.25
CTNS-202ENST00000381870 CDK17Q00537 523 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 KLHDC7AQ5VTJ3 777 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 CACNA2D3Q8IZS8 1091 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 RETREG2Q8NC44 543 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 ZNF483Q8TF39 744 aaPredicted RBP16.58■□□□□ 0.25
CTNS-202ENST00000381870 HVCN1Q96D96 273 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 MTMR8Q96EF0 704 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 STAMBPL1Q96FJ0 436 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 BAIAP2L1Q9UHR4 511 aa16.58■□□□□ 0.25
CTNS-202ENST00000381870 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 ATRNO75882 1429 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 BMP15O95972 392 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 RNASE9P60153 205 aaKnown RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 SARNPP82979 210 aaKnown RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 IFFO1Q0D2I5 559 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 LACTB2Q53H82 288 aaPredicted RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 ARFGAP2Q8N6H7 521 aa16.58■□□□□ 0.24
CTNS-202ENST00000381870 THOC1Q96FV9 657 aaKnown RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 DUSP9Q99956 384 aaKnown RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 BCCIPQ9P287 314 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTNS-202ENST00000381870 CNOT8Q9UFF9 292 aaKnown RBP16.58■□□□□ 0.24
CTNS-202ENST00000381870 EPHB6O15197 1021 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 GCKP35557 465 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 CSGALNACT2Q8N6G5 542 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 RSRC1Q96IZ7 334 aaKnown RBP16.57■□□□□ 0.24
CTNS-202ENST00000381870 STRCQ7RTU9 1775 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 PHF20L1A8MW92 1017 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
CTNS-202ENST00000381870 MYZAPP0CAP1 466 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 MCM7P33993 719 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
CTNS-202ENST00000381870 SLC8A3P57103 927 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 ZKSCAN8Q15776 578 aaPredicted RBP16.57■□□□□ 0.24
CTNS-202ENST00000381870 KCTD19Q17RG1 926 aaPredicted RBP16.57■□□□□ 0.24
CTNS-202ENST00000381870 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 MAB21L3Q8N8X9 362 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 NSMCE1Q8WV22 266 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 CCT6BQ92526 530 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 KRT23Q9C075 422 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 CNNM2Q9H8M5 875 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
CTNS-202ENST00000381870 ERICH2A1L162 156 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 GCP02774 474 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 XBP1P17861 261 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 HSD17B3P37058 310 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 STAT6P42226 847 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 MYO1EQ12965 1108 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 MIIPQ5JXC2 388 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 HIBCHQ6NVY1 386 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 TNFRSF25Q93038 417 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 CNOT6LQ96LI5 555 aaKnown RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 RNF26Q9BY78 433 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 KIF9Q9HAQ2 790 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 IQSEC3Q9UPP2 1182 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 C5orf60A6NFR6 353 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 PSMA7O14818 248 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 PRKAB2O43741 272 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 AKR1B10O60218 316 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 DNAJC8O75937 253 aaPredicted RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 MAGEA1P43355 309 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 RASSF7Q02833 373 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms