RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 IFIT3O14879 490 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-201ENST00000381513 AHCYL1O43865 530 aa20.96■□□□□ 0.95
SMARCD1-201ENST00000381513 PURBQ96QR8 312 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-201ENST00000381513 AATFQ9NY61 560 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMARCD1-201ENST00000381513 GPAA1O43292 621 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 MAGEA1P43355 309 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF174Q15697 407 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 MEA1Q16626 185 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF662Q6ZS27 426 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 DDX21Q9NR30 783 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 DNM2P50570 870 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 ZBED6P86452 979 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 PROCA1Q8NCQ7 364 aaPredicted RBP20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 INCENPQ9NQS7 918 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 SWAP70Q9UH65 585 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 PCDHGC5Q9Y5F6 944 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 SPATA31D1Q6ZQQ2 1576 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 FOXP2O15409 715 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 FESP07332 822 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 PRLRP16471 622 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 ATP4AP20648 1035 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 KCNJ2P63252 427 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 SELENOSQ9BQE4 189 aa20.95■□□□□ 0.94
SMARCD1-201ENST00000381513 RTN3O95197 1032 aaPredicted RBP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 BLMHQ13867 455 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 ERICH1Q86X53 443 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 TBC1D10CQ8IV04 446 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 MREGQ8N565 214 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 ELAC2Q9BQ52 826 aaKnown RBP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 FOXP1Q9H334 677 aaPredicted RBP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 SAMD15Q9P1V8 674 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 USP6P35125 1406 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 A0A1W2PQC6 194 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 DRD4P21917 467 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 DDX42Q86XP3 938 aaKnown RBP eCLIP20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 EXOC1Q9NV70 894 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 SLC5A4Q9NY91 659 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 MST1RQ04912 1400 aa20.94■□□□□ 0.94
SMARCD1-201ENST00000381513 LUC7L3O95232 432 aaKnown RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 RASSF7Q02833 373 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF844Q08AG5 666 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 KIF2BQ8N4N8 673 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF513Q8N8E2 541 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 B4GALNT2Q8NHY0 566 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 L3MBTL3Q96JM7 780 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 TLR10Q9BXR5 811 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 C5orf60A6NFR6 353 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 HGSO14964 777 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 VIMP08670 466 aaKnown RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 KIF11P52732 1056 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 BIRC3Q13489 604 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ANKRD20A2Q5SQ80 823 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ANKRD20A1Q5TYW2 823 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ANKRD20A3Q5VUR7 823 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 CWF19L1Q69YN2 538 aaKnown RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF572Q7Z3I7 529 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 IRF2BP1Q8IU81 584 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 LRRC45Q96CN5 670 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 TUBGCP2Q9BSJ2 902 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 NDST4Q9H3R1 872 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 XDHP47989 1333 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 N4BP2Q86UW6 1770 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 LRRD1A4D1F6 860 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 FTCDO95954 541 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 FERP16591 822 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 TBC1D25Q3MII6 688 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 PLCB1Q9NQ66 1216 aa20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 FAM217BQ9NTX9 383 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-201ENST00000381513 F8W031 263 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 RAD51CO43502 376 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 ORC4O43929 436 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 FMNL1O95466 1100 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 EIF4A3P38919 411 aaKnown RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 SLC5A9Q2M3M2 681 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 PACSIN2Q9UNF0 486 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 PDHA1P08559 390 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 PCK1P35558 622 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 HSPA9P38646 679 aaKnown RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 ALDH5A1P51649 535 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 C1orf141Q5JVX7 400 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 ZNF658Q5TYW1 1059 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 DRAXINQ8NBI3 349 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 EZH1Q92800 747 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 NOX5Q96PH1 765 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 C3P01024 1663 aa20.92■□□□□ 0.94
SMARCD1-201ENST00000381513 CFAP73A6NFT4 308 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 A8MUI8 341 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 RIPK1Q13546 671 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 MFN1Q8IWA4 741 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 ZKSCAN3Q9BRR0 538 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 TMX4Q9H1E5 349 aaPredicted RBP20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 CD2APQ9Y5K6 639 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 RGPD1P0DJD0 1748 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 MYH10P35580 1976 aa20.91■□□□□ 0.94
SMARCD1-201ENST00000381513 PLEKHG3A1L390 1219 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms