RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RIMBP3BA6NNM3 1639 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 RIMBP3Q9UFD9 1639 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 BACH1O14867 736 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 KCNQ3O43525 872 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ELF1P32519 619 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 RSPH3Q86UC2 560 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 KIF13AQ9H1H9 1805 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 OVOS2A0A0J9YW53 1432 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 OVOS2Q6IE36 1432 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 STK36Q9NRP7 1315 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PTGS1P23219 599 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ATP8B2P98198 1209 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 SPOUT1Q5T280 376 aaKnown RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 DSCC1Q9BVC3 393 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TRIM15Q9C019 465 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TSPYL2Q9H2G4 693 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TMEM51Q9NW97 253 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 DTNBO60941 627 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 FSBPO95073 299 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 EPB41P11171 864 aaKnown RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 BLVRAP53004 296 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 HLTFQ14527 1009 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 LONRF2Q1L5Z9 754 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 DHX32Q7L7V1 743 aaKnown RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TTC6Q86TZ1 520 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 GTF3C6Q969F1 213 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 KDM4CQ9H3R0 1056 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 LRRC37A3O60309 1634 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ZNF213O14771 459 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 WFS1O76024 890 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 CDK17Q00537 523 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ATP2A3Q93084 1043 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 BOLA2Q9H3K6 86 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 CAPN7Q9Y6W3 813 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ICE1Q9Y2F5 2266 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 KDM3AQ9Y4C1 1321 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 CETN3O15182 167 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 AARSP49588 968 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 IL9RQ01113 521 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 DDR1Q08345 913 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 FLIIQ13045 1269 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PABPC4Q13310 644 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ZBTB41Q5SVQ8 909 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 SNRNP27Q8WVK2 155 aaKnown RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TBX22Q9Y458 520 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 H0YCG3 227 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 KRT16P08779 473 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TTKP33981 857 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 MAP3K7CLP57077 242 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 VSTM4Q8IW00 320 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 DDI1Q8WTU0 396 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 USP6NLQ92738 828 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ZFRQ96KR1 1074 aaKnown RBP5.33□□□□□ -1.56
PTPRD-203ENST00000381196 AK8Q96MA6 479 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 SERPINI1Q99574 410 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PPP2R2CQ9Y2T4 447 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 MYH11P35749 1972 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PHACTR2O75167 634 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 RASGRF1Q13972 1273 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 AKAP4Q5JQC9 854 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PPP1R13BQ96KQ4 1090 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 LRGUKQ96M69 825 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 PRDM10Q9NQV6 1147 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ZMYM6O95789 1325 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 ABCC6O95255 1503 aa5.33□□□□□ -1.56
PTPRD-203ENST00000381196 TBC1D12O60347 775 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 IDEP14735 1019 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ALDH1B1P30837 517 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CC2D1AQ6P1N0 951 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TTC1Q99614 292 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SCINQ9Y6U3 715 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PASKQ96RG2 1323 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PDLIM1O00151 329 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PCSK2P16519 638 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SDSP20132 328 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 C4BPBP20851 252 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 POTEAQ6S8J7 498 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 HPS3Q969F9 1004 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 EPN3Q9H201 632 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 EPC1Q9H2F5 836 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SLITRK6Q9H5Y7 841 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ARHGEF10LQ9HCE6 1279 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 EXOC6BQ9Y2D4 811 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TUBGCP6Q96RT7 1819 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PTPRMP28827 1452 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 IRS4O14654 1257 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SLC9C1Q4G0N8 1177 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC122Q5T0U0 273 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DCAF15Q66K64 600 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 N4BP2L2Q92802 583 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MMADHCQ9H3L0 296 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 UBN1Q9NPG3 1134 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 UTP6Q9NYH9 597 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 A0A1W2PRG0 241 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms