RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 MLH1P40692 756 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 CCDC138Q96M89 665 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 EFCAB5A4FU69 1503 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 E2F6O75461 281 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 ETF1P62495 437 aaKnown RBP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 AKAP4Q5JQC9 854 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 NXNQ6DKJ4 435 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 TRAF7Q6Q0C0 670 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 CYP2J2P51589 502 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 PHKBQ93100 1093 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 MRGBPQ9NV56 204 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 COPG1Q9Y678 874 aaKnown RBP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 GMEB1Q9Y692 573 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 SAR1BQ9Y6B6 198 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 DDX42Q86XP3 938 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 NR1H4Q96RI1 486 aaPredicted RBP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 OLA1Q9NTK5 396 aaKnown RBP11.73□□□□□ -0.53
CLCN4-202ENST00000380833 SFMBT1Q9UHJ3 866 aa11.73□□□□□ -0.53
CLCN4-202ENST00000380833 PPIP5K1Q6PFW1 1433 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 APOA1P02647 267 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 LMNB1P20700 586 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SYNDIG1LA6NDD5 238 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 STK10O94804 968 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 GUCY2FP51841 1108 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ADAT2Q7Z6V5 191 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 KLHL7Q8IXQ5 586 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 TEKT2Q9UIF3 430 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 MCM8Q9UJA3 840 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 TLK1Q9UKI8 766 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 GOLGA8IPA6NC78 632 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ZBBXA8MT70 800 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SUPT3HO75486 399 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SRGAP1Q7Z6B7 1085 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ALKBH8Q96BT7 664 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 CFAP36Q96G28 342 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 PACSIN2Q9UNF0 486 aaPredicted RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 CHMP2BQ9UQN3 213 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ZBTB41Q5SVQ8 909 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SDCCAG3Q96C92 435 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 MRPS35P82673 323 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 DPP9Q86TI2 863 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 SMYD2Q9NRG4 433 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
CLCN4-202ENST00000380833 ERICH3Q5RHP9 1530 aa11.72□□□□□ -0.53
CLCN4-202ENST00000380833 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 ADCY3O60266 1144 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 DDIT3P35638 169 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 ANKRD35Q8N283 1001 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 P3H4Q92791 437 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 HINFPQ9BQA5 517 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 NOC2LQ9Y3T9 749 aaKnown RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 EXOC3O60645 756 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 AK2P54819 239 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 KLC1Q07866 573 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 TBL3Q12788 808 aaKnown RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 ASIC2Q16515 512 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 NOX5Q96PH1 765 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 KCNJ14Q9UNX9 436 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 DEAF1O75398 565 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 TRIM37O94972 964 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 MRPL28Q13084 256 aaKnown RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 KIFC3Q9BVG8 833 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 RAB17Q9H0T7 212 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 INTS9Q9NV88 658 aaKnown RBP11.71□□□□□ -0.53
CLCN4-202ENST00000380833 PYCARDQ9ULZ3 195 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 SERPINB3P29508 390 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 MSH2P43246 934 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 DAPK1P53355 1430 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 FBXW10Q5XX13 1052 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 KCTD16Q68DU8 428 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 ASXL2Q76L83 1435 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 C2CD5Q86YS7 1000 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 ASIC3Q9UHC3 531 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
CLCN4-202ENST00000380833 LSM1O15116 133 aaKnown RBP11.71□□□□□ -0.54
CLCN4-202ENST00000380833 PDE1AP54750 535 aa11.71□□□□□ -0.54
CLCN4-202ENST00000380833 FANCCQ00597 558 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms